Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 NPM1P22-201ENST00000427761 952 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 NDUFA5P4-201ENST00000436704 385 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 RPL29P7-201ENST00000440227 457 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC006326.1-201ENST00000445465 787 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AL589880.1-201ENST00000448271 287 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 MRPL35P4-201ENST00000453682 566 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 RPL5P32-201ENST00000454085 879 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 RNU6-956P-201ENST00000458868 103 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 RN7SL149P-201ENST00000465197 281 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 RN7SL849P-201ENST00000485236 295 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 PANCR-201ENST00000503456 493 ntTSL 5 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 OR5H4P-201ENST00000510851 923 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 RNU6-718P-201ENST00000516166 105 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC103833.1-201ENST00000517442 172 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AP003033.2-201ENST00000528901 805 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 OR7E87P-201ENST00000532397 929 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 DNM1P33-201ENST00000565222 270 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC002400.1-201ENST00000569310 726 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC009121.2-201ENST00000572913 714 ntTSL 3 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC024267.2-201ENST00000582737 417 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC084036.1-201ENST00000609190 508 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 ACACA-232ENST00000614438 569 ntTSL 2 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC091953.4-201ENST00000625179 341 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC099654.12-201ENST00000639868 649 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 SMG1P1-202ENST00000309865 4223 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 MRPL1-201ENST00000315567 1490 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AF121897.1-201ENST00000411867 3980 ntBASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC7.53□□□□□ -1.2
RSPO4Q2I0M5 AC008432.1-201ENST00000615912 1320 ntBASIC7.52□□□□□ -1.2
RSPO4Q2I0M5 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC7.52□□□□□ -1.2
RSPO4Q2I0M5 EEF1A1P4-201ENST00000359165 1405 ntBASIC7.52□□□□□ -1.2
RSPO4Q2I0M5 AC010997.6-201ENST00000623230 1645 ntBASIC7.52□□□□□ -1.2
RSPO4Q2I0M5 AC013444.1-201ENST00000428909 1904 ntBASIC7.52□□□□□ -1.2
RSPO4Q2I0M5 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
RSPO4Q2I0M5 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 KCNK2-201ENST00000391894 1491 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 MTND4P12-201ENST00000498999 1377 ntBASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 SNORA63-201ENST00000363450 132 ntBASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 SNORD115-48-201ENST00000364764 76 ntBASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 ATP5F1P4-201ENST00000397288 746 ntBASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 MIR1277-201ENST00000408536 78 ntBASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 ELOCP9-201ENST00000418624 239 ntBASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 SPATA20P1-201ENST00000423089 438 ntBASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 AC092691.2-201ENST00000461787 803 ntBASIC7.52□□□□□ -1.21
RSPO4Q2I0M5 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms