Protein–RNA interactions for Protein: P43088

PTGFR, Prostaglandin F2-alpha receptor, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRP43088 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.49
PTGFRP43088 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
PTGFRP43088 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.71□□□□□ -1.5
PTGFRP43088 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PTGFRP43088 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.71□□□□□ -1.5
PTGFRP43088 AC015799.1-201ENST00000622996 3122 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 RN7SKP118-201ENST00000364331 330 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 RNA5SP474-201ENST00000391234 90 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PTGFRP43088 AL662791.3-201ENST00000413771 776 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.71□□□□□ -1.5
PTGFRP43088 RPS7P12-201ENST00000422385 582 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 FECHP1-201ENST00000431896 1214 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 AL354893.1-201ENST00000433735 348 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.71□□□□□ -1.5
PTGFRP43088 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.71□□□□□ -1.5
PTGFRP43088 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.71□□□□□ -1.5
PTGFRP43088 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.71□□□□□ -1.5
PTGFRP43088 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.71□□□□□ -1.5
PTGFRP43088 AC079193.1-201ENST00000460497 588 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 RN7SL456P-201ENST00000469290 295 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 RN7SL654P-201ENST00000479178 292 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 AC092824.1-201ENST00000483524 576 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.71□□□□□ -1.5
PTGFRP43088 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.71□□□□□ -1.5
PTGFRP43088 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.71□□□□□ -1.5
PTGFRP43088 AC021820.1-201ENST00000525564 808 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.71□□□□□ -1.5
PTGFRP43088 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.71□□□□□ -1.5
PTGFRP43088 HNRNPCP1-201ENST00000556181 766 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 AL132640.1-201ENST00000559594 619 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.71□□□□□ -1.5
PTGFRP43088 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.71□□□□□ -1.5
PTGFRP43088 AL078623.1-201ENST00000602702 907 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 AC099777.1-201ENST00000603779 1070 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 FXYD6P1-201ENST00000604857 285 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 AC012511.1-201ENST00000608140 449 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.71□□□□□ -1.5
PTGFRP43088 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.71□□□□□ -1.5
PTGFRP43088 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.71□□□□□ -1.5
PTGFRP43088 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
PTGFRP43088 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.71□□□□□ -1.5
PTGFRP43088 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PTGFRP43088 QRSL1P3-201ENST00000552666 1316 ntBASIC5.71□□□□□ -1.5
PTGFRP43088 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTGFRP43088 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PTGFRP43088 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTGFRP43088 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTGFRP43088 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTGFRP43088 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTGFRP43088 ZNF806-201ENST00000438300 1774 ntBASIC5.7□□□□□ -1.5
PTGFRP43088 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.7□□□□□ -1.5
PTGFRP43088 CASC19-255ENST00000641733 1385 ntBASIC5.7□□□□□ -1.5
PTGFRP43088 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
PTGFRP43088 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTGFRP43088 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
PTGFRP43088 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTGFRP43088 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTGFRP43088 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.7□□□□□ -1.5
PTGFRP43088 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTGFRP43088 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTGFRP43088 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTGFRP43088 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PTGFRP43088 SNORA70H-201ENST00000383910 135 ntBASIC5.7□□□□□ -1.5
PTGFRP43088 SNORA70J-201ENST00000384182 135 ntBASIC5.7□□□□□ -1.5
PTGFRP43088 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PTGFRP43088 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PTGFRP43088 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.7□□□□□ -1.5
PTGFRP43088 RN7SKP268-201ENST00000411107 316 ntBASIC5.7□□□□□ -1.5
PTGFRP43088 RN7SKP296-201ENST00000411185 341 ntBASIC5.7□□□□□ -1.5
PTGFRP43088 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTGFRP43088 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.7□□□□□ -1.5
PTGFRP43088 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.7□□□□□ -1.5
PTGFRP43088 AC009362.1-201ENST00000427253 406 ntBASIC5.7□□□□□ -1.5
PTGFRP43088 Z68868.1-201ENST00000429048 544 ntBASIC5.7□□□□□ -1.5
PTGFRP43088 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.7□□□□□ -1.5
PTGFRP43088 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC5.7□□□□□ -1.5
PTGFRP43088 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.7□□□□□ -1.5
PTGFRP43088 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.7□□□□□ -1.5
PTGFRP43088 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.7□□□□□ -1.5
PTGFRP43088 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.7□□□□□ -1.5
PTGFRP43088 MGAT2P1-201ENST00000449718 797 ntBASIC5.7□□□□□ -1.5
PTGFRP43088 AL929410.2-201ENST00000451170 189 ntBASIC5.7□□□□□ -1.5
PTGFRP43088 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms