Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC5.99□□□□□ -1.45
SPTA1P02549 SNORA38B-201ENST00000363524 131 ntBASIC5.99□□□□□ -1.45
SPTA1P02549 RNA5SP514-201ENST00000363717 111 ntBASIC5.99□□□□□ -1.45
SPTA1P02549 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.99□□□□□ -1.45
SPTA1P02549 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 HMGB1P32-201ENST00000425971 565 ntBASIC5.99□□□□□ -1.45
SPTA1P02549 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.99□□□□□ -1.45
SPTA1P02549 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.99□□□□□ -1.45
SPTA1P02549 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.99□□□□□ -1.45
SPTA1P02549 AC083806.1-201ENST00000468934 316 ntBASIC5.99□□□□□ -1.45
SPTA1P02549 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.99□□□□□ -1.45
SPTA1P02549 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 AC092332.1-201ENST00000563684 829 ntBASIC5.99□□□□□ -1.45
SPTA1P02549 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 CR382285.1-202ENST00000604687 547 ntBASIC5.99□□□□□ -1.45
SPTA1P02549 AC073389.3-201ENST00000609434 935 ntBASIC5.99□□□□□ -1.45
SPTA1P02549 AL080312.2-201ENST00000613001 630 ntBASIC5.99□□□□□ -1.45
SPTA1P02549 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 MAGEB16-202ENST00000399987 1736 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC5.99□□□□□ -1.45
SPTA1P02549 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC5.99□□□□□ -1.45
SPTA1P02549 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC5.99□□□□□ -1.45
SPTA1P02549 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.99□□□□□ -1.45
SPTA1P02549 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC5.99□□□□□ -1.45
SPTA1P02549 IGKV3D-25-201ENST00000519599 235 ntBASIC5.99□□□□□ -1.45
SPTA1P02549 IGHV3-75-201ENST00000523951 358 ntBASIC5.99□□□□□ -1.45
SPTA1P02549 AP001264.1-201ENST00000620602 703 ntBASIC5.99□□□□□ -1.45
SPTA1P02549 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 CR1-204ENST00000367052 7469 ntTSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SPTA1P02549 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC5.99□□□□□ -1.45
SPTA1P02549 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SPTA1P02549 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 RN7SKP47-201ENST00000365347 328 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 RAB28P1-201ENST00000411517 641 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 GSTA7P-201ENST00000438425 448 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SPTA1P02549 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.98□□□□□ -1.45
SPTA1P02549 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.98□□□□□ -1.45
SPTA1P02549 AC027369.2-201ENST00000528030 440 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 AC036111.2-201ENST00000533247 901 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.98□□□□□ -1.45
SPTA1P02549 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.98□□□□□ -1.45
SPTA1P02549 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
SPTA1P02549 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.98□□□□□ -1.45
SPTA1P02549 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.98□□□□□ -1.45
SPTA1P02549 FAM27E2-201ENST00000619668 403 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.98□□□□□ -1.45
SPTA1P02549 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 AL591848.4-201ENST00000567832 3472 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SPTA1P02549 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 AL355974.1-201ENST00000618896 1708 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.98□□□□□ -1.45
SPTA1P02549 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SPTA1P02549 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC5.98□□□□□ -1.45
SPTA1P02549 RN7SKP296-201ENST00000411185 341 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 RPS27P18-201ENST00000431701 247 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.98□□□□□ -1.45
SPTA1P02549 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC5.98□□□□□ -1.45
SPTA1P02549 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.98□□□□□ -1.45
SPTA1P02549 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.98□□□□□ -1.45
SPTA1P02549 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.98□□□□□ -1.45
SPTA1P02549 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.98□□□□□ -1.45
SPTA1P02549 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.98□□□□□ -1.45
SPTA1P02549 RN7SKP238-201ENST00000516483 249 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.98□□□□□ -1.45
SPTA1P02549 COX6CP7-201ENST00000597056 208 ntBASIC5.98□□□□□ -1.45
SPTA1P02549 SUMO2P15-201ENST00000604285 278 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms