Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC4.82□□□□□ -1.64
NACAE9PAV3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NACAE9PAV3 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC4.82□□□□□ -1.64
NACAE9PAV3 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NACAE9PAV3 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC4.82□□□□□ -1.64
NACAE9PAV3 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
NACAE9PAV3 AC096537.2-201ENST00000413707 714 ntBASIC4.82□□□□□ -1.64
NACAE9PAV3 FABP5P1-201ENST00000423401 411 ntBASIC4.82□□□□□ -1.64
NACAE9PAV3 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NACAE9PAV3 AC245452.2-201ENST00000435222 392 ntBASIC4.82□□□□□ -1.64
NACAE9PAV3 RPEP4-201ENST00000437636 602 ntBASIC4.82□□□□□ -1.64
NACAE9PAV3 FABP5P2-201ENST00000439042 408 ntBASIC4.82□□□□□ -1.64
NACAE9PAV3 AC064862.5-201ENST00000440618 334 ntBASIC4.82□□□□□ -1.64
NACAE9PAV3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC4.82□□□□□ -1.64
NACAE9PAV3 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC4.82□□□□□ -1.64
NACAE9PAV3 AC092824.1-201ENST00000483524 576 ntBASIC4.82□□□□□ -1.64
NACAE9PAV3 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC4.82□□□□□ -1.64
NACAE9PAV3 SNX18P23-201ENST00000510867 677 ntBASIC4.82□□□□□ -1.64
NACAE9PAV3 AC073581.1-201ENST00000519036 575 ntBASIC4.82□□□□□ -1.64
NACAE9PAV3 IGHVII-51-2-201ENST00000519778 259 ntBASIC4.82□□□□□ -1.64
NACAE9PAV3 AC107958.1-201ENST00000556576 290 ntBASIC4.82□□□□□ -1.64
NACAE9PAV3 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC4.82□□□□□ -1.64
NACAE9PAV3 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.82□□□□□ -1.64
NACAE9PAV3 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC4.82□□□□□ -1.64
NACAE9PAV3 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC4.82□□□□□ -1.64
NACAE9PAV3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NACAE9PAV3 AL359694.2-201ENST00000567753 1615 ntBASIC4.82□□□□□ -1.64
NACAE9PAV3 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
NACAE9PAV3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NACAE9PAV3 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NACAE9PAV3 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
NACAE9PAV3 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.81□□□□□ -1.64
NACAE9PAV3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
NACAE9PAV3 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC4.81□□□□□ -1.64
NACAE9PAV3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 OR56A4-201ENST00000330728 1209 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NACAE9PAV3 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC4.81□□□□□ -1.64
NACAE9PAV3 RN7SKP296-201ENST00000411185 341 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 NPM1P36-201ENST00000415681 835 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 AL672212.1-201ENST00000422246 400 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 LSM3P3-201ENST00000436601 306 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC4.81□□□□□ -1.64
NACAE9PAV3 RN7SL393P-201ENST00000463588 296 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 AC098818.1-201ENST00000478593 252 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 RPL29P23-201ENST00000486188 442 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 AC096754.1-201ENST00000508904 818 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.81□□□□□ -1.64
NACAE9PAV3 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC4.81□□□□□ -1.64
NACAE9PAV3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.81□□□□□ -1.64
NACAE9PAV3 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.81□□□□□ -1.64
NACAE9PAV3 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.81□□□□□ -1.64
NACAE9PAV3 BMS1P16-201ENST00000556075 1147 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC4.81□□□□□ -1.64
NACAE9PAV3 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.81□□□□□ -1.64
NACAE9PAV3 AC020765.1-201ENST00000604296 328 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NACAE9PAV3 AC005355.2-201ENST00000625064 484 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC4.81□□□□□ -1.64
NACAE9PAV3 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
NACAE9PAV3 CUBNP3-201ENST00000457461 1784 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 AC005618.1-201ENST00000606901 3148 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 AC022034.1-201ENST00000512867 2156 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC4.81□□□□□ -1.64
NACAE9PAV3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NACAE9PAV3 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
NACAE9PAV3 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NACAE9PAV3 AC009135.2-201ENST00000624136 1768 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 AL353133.1-201ENST00000407695 401 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 RPLP1P10-201ENST00000413972 339 ntBASIC4.81□□□□□ -1.64
NACAE9PAV3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC4.81□□□□□ -1.64
NACAE9PAV3 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC4.81□□□□□ -1.64
NACAE9PAV3 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC4.81□□□□□ -1.64
NACAE9PAV3 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC4.81□□□□□ -1.64
NACAE9PAV3 AL121578.2-201ENST00000448797 447 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms