Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 AC022325.1-201ENST00000502748 2199 ntBASIC8.13□□□□□ -1.11
SCN11AQ9UI33 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC8.13□□□□□ -1.11
SCN11AQ9UI33 AC005839.1-201ENST00000624148 3213 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 RNFT1P3-201ENST00000340898 1052 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 AL512422.1-201ENST00000407033 553 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 NPM1P19-201ENST00000450070 712 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 STARD6-202ENST00000577499 696 ntTSL 2 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 OR7A11P-201ENST00000597719 953 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 AC009120.2-204ENST00000621548 2032 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 AC025809.2-201ENST00000625085 1802 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 AC104843.2-201ENST00000427666 297 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 MTND6P12-201ENST00000428247 522 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 SUMO2P10-201ENST00000452006 288 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 Y_RNA.710-201ENST00000516975 110 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 AC027308.1-201ENST00000517993 110 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 LAPTM4BP2-201ENST00000604542 446 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 FAM72A-208ENST00000607379 1139 ntBASIC8.12□□□□□ -1.11
SCN11AQ9UI33 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC8.12□□□□□ -1.11
SCN11AQ9UI33 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 ST7-203ENST00000393443 2360 ntTSL 2 BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 USP40-202ENST00000409945 1946 ntTSL 2 BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 CASC19-238ENST00000641523 1558 ntBASIC8.11□□□□□ -1.11
SCN11AQ9UI33 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 SNORA21-201ENST00000362423 132 ntBASIC8.11□□□□□ -1.11
SCN11AQ9UI33 RN7SKP292-201ENST00000365522 317 ntBASIC8.11□□□□□ -1.11
SCN11AQ9UI33 AL445238.1-204ENST00000400311 463 ntBASIC8.11□□□□□ -1.11
SCN11AQ9UI33 MIR937-201ENST00000401271 86 ntBASIC8.11□□□□□ -1.11
SCN11AQ9UI33 RPL12P12-201ENST00000424633 501 ntBASIC8.11□□□□□ -1.11
SCN11AQ9UI33 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 RPA2P1-201ENST00000556557 721 ntBASIC8.11□□□□□ -1.11
SCN11AQ9UI33 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 AC139493.1-201ENST00000604368 397 ntBASIC8.11□□□□□ -1.11
SCN11AQ9UI33 AC096708.4-201ENST00000620563 552 ntBASIC8.11□□□□□ -1.11
SCN11AQ9UI33 AL136228.1-201ENST00000622221 319 ntBASIC8.11□□□□□ -1.11
SCN11AQ9UI33 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 AC009166.2-201ENST00000624410 2833 ntBASIC8.11□□□□□ -1.11
SCN11AQ9UI33 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 AL023806.3-201ENST00000638502 2704 ntBASIC8.11□□□□□ -1.11
SCN11AQ9UI33 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SCN11AQ9UI33 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SCN11AQ9UI33 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms