Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 CRYGGP-201ENST00000443337 145 ntBASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 FTH1P8-201ENST00000498161 514 ntBASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 AC073581.1-201ENST00000519036 575 ntBASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 AL596275.2-207ENST00000641188 675 ntBASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC7.81□□□□□ -1.16
CLIP2Q9UDT6 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AC119674.1-204ENST00000641348 1343 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AC020658.2-201ENST00000559030 4020 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 RN7SKP250-201ENST00000363924 321 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 RN7SKP296-201ENST00000411185 341 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 THEM7P-201ENST00000419556 672 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AL139184.1-202ENST00000422303 222 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 CT45A11P-201ENST00000448043 1134 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AC093870.1-201ENST00000506837 213 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 GUSBP9-201ENST00000510138 584 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 RN7SKP183-201ENST00000517169 324 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AC037479.1-201ENST00000558361 625 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AC067852.5-201ENST00000589299 310 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AC010333.3-201ENST00000615100 402 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 MIR7854-201ENST00000620068 65 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AP000577.1-201ENST00000624366 878 ntBASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP2Q9UDT6 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 AC090181.3-201ENST00000624777 1514 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 RPL24P4-201ENST00000326586 421 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 RN7SKP171-201ENST00000364417 303 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 AL645939.3-201ENST00000435408 225 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 AC115223.1-201ENST00000466377 870 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 AC092718.4-201ENST00000566639 716 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 AC025283.1-201ENST00000572039 734 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 RN7SL270P-201ENST00000579643 281 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 AC011921.2-201ENST00000589465 152 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 AC073488.9-201ENST00000631601 754 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 PPBPP2-201ENST00000513150 1362 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 AC005618.1-201ENST00000606901 3148 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms