Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC016831.2-201ENST00000417179 352 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC245047.5-201ENST00000437312 556 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC114928.1-201ENST00000446516 415 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AL451074.4-201ENST00000447545 470 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AL390026.1-201ENST00000456647 457 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 OR7E62P-201ENST00000456741 477 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC005550.2-201ENST00000476382 318 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC147055.3-201ENST00000510547 851 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 MTCO1P49-201ENST00000523429 802 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 MTCO2P15-201ENST00000532655 656 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC018523.1-201ENST00000534211 512 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC090888.3-201ENST00000558917 509 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC025283.1-201ENST00000572039 734 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AL390058.1-201ENST00000603834 629 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC010245.2-201ENST00000606908 1167 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AP000254.1-201ENST00000609934 520 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC017083.3-201ENST00000609955 700 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 TUSC7.1-201ENST00000610969 165 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 pRNA.12-201ENST00000614353 90 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 pRNA.3-201ENST00000615048 90 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC243830.2-201ENST00000618067 630 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AL158163.2-201ENST00000619110 700 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 BX005040.2-201ENST00000620504 370 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC103706.2-201ENST00000638080 240 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 FLJ42393-201ENST00000623801 2270 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 AL391380.1-201ENST00000439300 1432 ntBASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.24□□□□□ -1.41
SSBP3Q9BWW4 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 SOCS5P5-201ENST00000402732 1586 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 AL359396.1-201ENST00000623151 2376 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 Y_RNA.77-201ENST00000362962 107 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 RNA5SP260-201ENST00000363849 111 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 RNU6-517P-201ENST00000384362 110 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 NUS1P4-201ENST00000401550 585 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 LYPLA1P3-201ENST00000402650 695 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 FCF1P5-201ENST00000406490 482 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 RN7SKP236-201ENST00000410635 284 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 CDY17P-201ENST00000414121 1282 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 ELOCP17-201ENST00000414751 326 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 AL158050.1-201ENST00000416077 457 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 AC231533.2-201ENST00000419045 978 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 RBM22P7-201ENST00000421321 280 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.23□□□□□ -1.41
SSBP3Q9BWW4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms