Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 IGHVIII-67-4-201ENST00000524281 296 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC124891.1-201ENST00000536322 519 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 HNRNPA3P9-201ENST00000604913 979 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 MAPK10-379ENST00000642013 1385 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 BX322650.1-201ENST00000332359 2143 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 EEF1A1P21-201ENST00000512363 1344 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 KARSP2-201ENST00000415696 1639 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 RNA5SP115-201ENST00000411160 107 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 OSTCP4-201ENST00000424397 449 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC093635.1-201ENST00000609028 555 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 ZNF43-202ENST00000357491 5249 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 NPL-212ENST00000614468 2376 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 PPIAP22-201ENST00000358455 498 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 RPS10P18-201ENST00000442662 495 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 HMGN1P36-201ENST00000446623 298 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 SBDSP1-204ENST00000453858 737 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 GM2AP2-201ENST00000491764 562 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC018645.1-201ENST00000505003 109 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 UGT2A3P7-201ENST00000510485 734 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 SCARNA21.2-201ENST00000516600 166 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AL078601.3-201ENST00000573303 535 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC004908.1-201ENST00000606572 541 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AL049541.2-201ENST00000626377 555 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AL355375.1-201ENST00000405686 392 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC009500.1-201ENST00000420684 583 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 LSM3P3-201ENST00000436601 306 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 RPL12P30-201ENST00000488389 499 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC2.02□□□□□ -2.09
SYNE1Q8NF91 SNX18P10-201ENST00000625014 519 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 AC090771.1-201ENST00000585803 1618 ntBASIC2.02□□□□□ -2.09
SYNE1Q8NF91 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms