Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 SOD1P1-201ENST00000407803 440 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 NME1P1-201ENST00000420914 382 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 RPS10P21-201ENST00000430654 475 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 SNRPBP1-201ENST00000443634 282 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 RPL7AP71-201ENST00000451120 739 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 AF305872.1-201ENST00000485217 471 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 RN7SL868P-201ENST00000485915 303 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 NPM1P27-201ENST00000502784 830 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 AC010442.1-201ENST00000515583 816 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 CARSP2-201ENST00000520688 277 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 RN7SL689P-201ENST00000577215 297 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 AL049840.5-201ENST00000602827 552 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 BUB1P1-201ENST00000603541 607 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 AL157899.1-201ENST00000604110 936 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 MIR6736-201ENST00000616799 59 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 AL031123.3-201ENST00000623345 1837 ntBASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.91□□□□□ -1.3
CCDC50Q8IVM0 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AC105749.1-201ENST00000631338 2008 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 SNORA38B-201ENST00000363524 131 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 RN7SKP237-201ENST00000364663 301 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 RNU11-201ENST00000387069 134 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 FDPSP6-201ENST00000425091 512 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 CR383656.1-201ENST00000484916 377 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 RPL10P7-201ENST00000495649 625 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 RNA5SP318-201ENST00000516352 92 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AL445383.1-201ENST00000554689 874 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AC126323.4-201ENST00000566935 234 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 RN7SL131P-201ENST00000579043 256 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 MIR3159-201ENST00000584572 74 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AL031429.2-201ENST00000602605 649 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AL360012.1-201ENST00000602813 131 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AC025171.4-201ENST00000607250 1047 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 PTCHD3P1-201ENST00000612350 537 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AL137246.2-201ENST00000613439 662 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 MIR6737-201ENST00000617385 70 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AL512353.3-201ENST00000417517 1326 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AC022613.3-201ENST00000560740 1346 ntBASIC6.9□□□□□ -1.3
CCDC50Q8IVM0 AC093844.1-201ENST00000514910 1361 ntBASIC6.9□□□□□ -1.31
CCDC50Q8IVM0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.31
CCDC50Q8IVM0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.9□□□□□ -1.31
CCDC50Q8IVM0 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.9□□□□□ -1.31
CCDC50Q8IVM0 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.9□□□□□ -1.31
CCDC50Q8IVM0 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
CCDC50Q8IVM0 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.9□□□□□ -1.31
CCDC50Q8IVM0 AC023245.2-201ENST00000530760 2978 ntBASIC6.9□□□□□ -1.31
CCDC50Q8IVM0 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CCDC50Q8IVM0 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.89□□□□□ -1.31
CCDC50Q8IVM0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms