Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC4.64□□□□□ -1.67
CKS1BP61024 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CKS1BP61024 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.64□□□□□ -1.67
CKS1BP61024 AC125232.1-201ENST00000452554 1408 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
CKS1BP61024 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CKS1BP61024 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CKS1BP61024 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CKS1BP61024 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CKS1BP61024 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CKS1BP61024 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CKS1BP61024 RNA5SP302-201ENST00000364896 100 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 SNORA5.1-201ENST00000384275 131 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC4.64□□□□□ -1.67
CKS1BP61024 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CKS1BP61024 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC4.64□□□□□ -1.67
CKS1BP61024 AC007568.1-201ENST00000422912 471 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC4.64□□□□□ -1.67
CKS1BP61024 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC4.64□□□□□ -1.67
CKS1BP61024 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC4.64□□□□□ -1.67
CKS1BP61024 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CKS1BP61024 CYP2C56P-201ENST00000440076 291 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 AC093799.1-201ENST00000452411 499 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 PYM1-204ENST00000454792 884 ntTSL 2 BASIC4.64□□□□□ -1.67
CKS1BP61024 OR7E62P-201ENST00000456741 477 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 SNORA81.1-201ENST00000458922 177 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 RN7SL688P-201ENST00000471754 275 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 RN7SL58P-201ENST00000473445 294 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 RN7SL259P-201ENST00000478499 253 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 RN7SL382P-201ENST00000482631 282 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC4.64□□□□□ -1.67
CKS1BP61024 LECT2-203ENST00000512872 762 ntTSL 5 BASIC4.64□□□□□ -1.67
CKS1BP61024 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC4.64□□□□□ -1.67
CKS1BP61024 AC068790.1-201ENST00000536166 355 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC4.64□□□□□ -1.67
CKS1BP61024 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC4.64□□□□□ -1.67
CKS1BP61024 AC026458.1-201ENST00000564330 438 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC4.64□□□□□ -1.67
CKS1BP61024 AP005262.1-201ENST00000582646 997 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC4.64□□□□□ -1.67
CKS1BP61024 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.64□□□□□ -1.67
CKS1BP61024 AP001267.4-201ENST00000602598 545 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.64□□□□□ -1.67
CKS1BP61024 OR6L2P-201ENST00000608207 925 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CKS1BP61024 AC135050.6-202ENST00000613584 392 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.64□□□□□ -1.67
CKS1BP61024 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC4.64□□□□□ -1.67
CKS1BP61024 AC011471.4-201ENST00000638271 216 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.64□□□□□ -1.67
CKS1BP61024 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CKS1BP61024 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CKS1BP61024 ADAM24P-201ENST00000398655 2101 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CKS1BP61024 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CKS1BP61024 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC4.64□□□□□ -1.67
CKS1BP61024 TTC39DP-201ENST00000416781 1688 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 AL731532.1-201ENST00000623972 4236 ntBASIC4.64□□□□□ -1.67
CKS1BP61024 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CKS1BP61024 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.63□□□□□ -1.67
CKS1BP61024 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CKS1BP61024 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC4.63□□□□□ -1.67
CKS1BP61024 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CKS1BP61024 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC4.63□□□□□ -1.67
CKS1BP61024 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CKS1BP61024 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
CKS1BP61024 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CKS1BP61024 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CKS1BP61024 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CKS1BP61024 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.63□□□□□ -1.67
CKS1BP61024 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CKS1BP61024 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CKS1BP61024 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CKS1BP61024 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CKS1BP61024 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CKS1BP61024 SNORA55-201ENST00000364587 135 ntBASIC4.63□□□□□ -1.67
CKS1BP61024 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC4.63□□□□□ -1.67
CKS1BP61024 RPL9P21-201ENST00000392269 505 ntBASIC4.63□□□□□ -1.67
CKS1BP61024 AL360271.1-201ENST00000395679 510 ntBASIC4.63□□□□□ -1.67
CKS1BP61024 LSM5-202ENST00000409292 538 ntTSL 2 BASIC4.63□□□□□ -1.67
CKS1BP61024 RN7SKP17-201ENST00000411242 351 ntBASIC4.63□□□□□ -1.67
CKS1BP61024 SETP15-201ENST00000412724 337 ntBASIC4.63□□□□□ -1.67
CKS1BP61024 AC096537.2-201ENST00000413707 714 ntBASIC4.63□□□□□ -1.67
CKS1BP61024 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC4.63□□□□□ -1.67
CKS1BP61024 HSPE1P16-201ENST00000426640 348 ntBASIC4.63□□□□□ -1.67
CKS1BP61024 HMGN2P27-201ENST00000427352 270 ntBASIC4.63□□□□□ -1.67
CKS1BP61024 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC4.63□□□□□ -1.67
CKS1BP61024 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CKS1BP61024 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
CKS1BP61024 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CKS1BP61024 AL604028.2-201ENST00000437848 788 ntBASIC4.63□□□□□ -1.67
CKS1BP61024 AC079781.1-201ENST00000441505 394 ntBASIC4.63□□□□□ -1.67
CKS1BP61024 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC4.63□□□□□ -1.67
CKS1BP61024 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.63□□□□□ -1.67
CKS1BP61024 AC016489.1-201ENST00000461109 375 ntBASIC4.63□□□□□ -1.67
CKS1BP61024 RPL34P34-201ENST00000465389 354 ntBASIC4.63□□□□□ -1.67
CKS1BP61024 AC117395.1-201ENST00000487390 403 ntBASIC4.63□□□□□ -1.67
CKS1BP61024 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.63□□□□□ -1.67
CKS1BP61024 SCARNA6-201ENST00000515982 265 ntBASIC4.63□□□□□ -1.67
CKS1BP61024 KCTD9P4-201ENST00000526766 1166 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 517.3 ms