Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AL354718.1-201ENST00000619764 589 ntBASIC7.09□□□□□ -1.27
CACNA2D1P54289 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.09□□□□□ -1.27
CACNA2D1P54289 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.09□□□□□ -1.27
CACNA2D1P54289 AC104581.5-201ENST00000624171 7141 ntBASIC7.09□□□□□ -1.27
CACNA2D1P54289 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.09□□□□□ -1.27
CACNA2D1P54289 AC012213.2-201ENST00000562917 4597 ntBASIC7.09□□□□□ -1.27
CACNA2D1P54289 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
CACNA2D1P54289 AP000547.3-204ENST00000588548 2523 ntBASIC7.09□□□□□ -1.27
CACNA2D1P54289 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.09□□□□□ -1.27
CACNA2D1P54289 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CACNA2D1P54289 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CACNA2D1P54289 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
CACNA2D1P54289 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.09□□□□□ -1.27
CACNA2D1P54289 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CACNA2D1P54289 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CACNA2D1P54289 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CACNA2D1P54289 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CACNA2D1P54289 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CACNA2D1P54289 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
CACNA2D1P54289 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
CACNA2D1P54289 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
CACNA2D1P54289 AC110597.1-201ENST00000562669 3176 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CACNA2D1P54289 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CACNA2D1P54289 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 RPL24P4-201ENST00000326586 421 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 PPIAP24-201ENST00000328558 471 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CACNA2D1P54289 RN7SKP199-201ENST00000410325 305 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 Z82198.3-201ENST00000421145 199 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 AC092106.2-201ENST00000436597 487 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 RPL12P24-201ENST00000474907 486 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 AC026826.1-201ENST00000493002 361 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 RNA5SP318-201ENST00000516352 92 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 RNU6-467P-201ENST00000517027 110 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CACNA2D1P54289 AC091304.4-201ENST00000565703 620 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 AL158211.1-201ENST00000566763 763 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 MIR3157-201ENST00000578688 85 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 RPL7AP69-201ENST00000595306 806 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 AC245052.7-201ENST00000601161 359 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 AC091133.5-201ENST00000603088 301 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CACNA2D1P54289 AC131009.3-201ENST00000621809 287 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 MIR6503-201ENST00000622884 86 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 AL035425.4-201ENST00000624509 1063 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 AC007603.3-201ENST00000636915 979 ntBASIC7.08□□□□□ -1.28
CACNA2D1P54289 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CACNA2D1P54289 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
CACNA2D1P54289 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CACNA2D1P54289 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.08□□□□□ -1.28
CACNA2D1P54289 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
CACNA2D1P54289 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.07□□□□□ -1.28
CACNA2D1P54289 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CACNA2D1P54289 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CACNA2D1P54289 AC007012.2-201ENST00000623206 1676 ntBASIC7.07□□□□□ -1.28
CACNA2D1P54289 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.07□□□□□ -1.28
CACNA2D1P54289 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CACNA2D1P54289 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CACNA2D1P54289 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
CACNA2D1P54289 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CACNA2D1P54289 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
CACNA2D1P54289 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
CACNA2D1P54289 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.07□□□□□ -1.28
CACNA2D1P54289 RNU4-64P-201ENST00000410795 131 ntBASIC7.07□□□□□ -1.28
CACNA2D1P54289 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.07□□□□□ -1.28
CACNA2D1P54289 RPS21P8-201ENST00000413365 247 ntBASIC7.07□□□□□ -1.28
CACNA2D1P54289 AL353626.3-201ENST00000413399 657 ntBASIC7.07□□□□□ -1.28
CACNA2D1P54289 MTND4LP17-201ENST00000414607 293 ntBASIC7.07□□□□□ -1.28
CACNA2D1P54289 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.07□□□□□ -1.28
CACNA2D1P54289 SETP10-201ENST00000424368 814 ntBASIC7.07□□□□□ -1.28
CACNA2D1P54289 DUTP4-201ENST00000424782 475 ntBASIC7.07□□□□□ -1.28
CACNA2D1P54289 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC7.07□□□□□ -1.28
CACNA2D1P54289 CRYGGP-201ENST00000443337 145 ntBASIC7.07□□□□□ -1.28
CACNA2D1P54289 KF459542.1-201ENST00000450908 553 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms