Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CDC42P3-201ENST00000518493 633 ntBASIC6.78□□□□□ -1.32
HTTP42858 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.78□□□□□ -1.32
HTTP42858 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.78□□□□□ -1.32
HTTP42858 SUGT1P3-202ENST00000604259 383 ntBASIC6.78□□□□□ -1.32
HTTP42858 FAM27E4-201ENST00000605259 342 ntBASIC6.78□□□□□ -1.32
HTTP42858 PARP4P2-201ENST00000446672 3326 ntBASIC6.78□□□□□ -1.32
HTTP42858 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.78□□□□□ -1.32
HTTP42858 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HTTP42858 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC6.78□□□□□ -1.32
HTTP42858 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
HTTP42858 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HTTP42858 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HTTP42858 TMEM75-201ENST00000624314 2165 ntBASIC6.78□□□□□ -1.32
HTTP42858 AC005332.9-201ENST00000620266 2921 ntBASIC6.78□□□□□ -1.32
HTTP42858 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
HTTP42858 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HTTP42858 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.78□□□□□ -1.32
HTTP42858 AL590240.2-201ENST00000413370 894 ntBASIC6.78□□□□□ -1.32
HTTP42858 NME1P1-201ENST00000420914 382 ntBASIC6.78□□□□□ -1.32
HTTP42858 OR5W1P-201ENST00000423705 938 ntBASIC6.78□□□□□ -1.32
HTTP42858 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.78□□□□□ -1.32
HTTP42858 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.78□□□□□ -1.32
HTTP42858 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.78□□□□□ -1.32
HTTP42858 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.78□□□□□ -1.32
HTTP42858 FAM25E-202ENST00000608562 189 ntBASIC6.78□□□□□ -1.32
HTTP42858 AP000892.3-201ENST00000624094 5326 ntBASIC6.78□□□□□ -1.32
HTTP42858 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HTTP42858 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HTTP42858 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.77□□□□□ -1.33
HTTP42858 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.77□□□□□ -1.33
HTTP42858 MYO7B-203ENST00000428314 6715 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HTTP42858 OR6E1P-201ENST00000414424 923 ntBASIC6.77□□□□□ -1.33
HTTP42858 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HTTP42858 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.77□□□□□ -1.33
HTTP42858 AL772161.1-201ENST00000439130 476 ntBASIC6.77□□□□□ -1.33
HTTP42858 RPL15P21-201ENST00000495592 567 ntBASIC6.77□□□□□ -1.33
HTTP42858 AL512310.9-201ENST00000553311 948 ntBASIC6.77□□□□□ -1.33
HTTP42858 MIR3189-201ENST00000578735 73 ntBASIC6.77□□□□□ -1.33
HTTP42858 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HTTP42858 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HTTP42858 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HTTP42858 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.33
HTTP42858 RAD51D-202ENST00000345365 9988 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HTTP42858 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HTTP42858 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HTTP42858 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HTTP42858 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HTTP42858 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HTTP42858 RNA5SP339-201ENST00000390987 122 ntBASIC6.77□□□□□ -1.33
HTTP42858 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.77□□□□□ -1.33
HTTP42858 AC005033.1-201ENST00000428904 813 ntBASIC6.77□□□□□ -1.33
HTTP42858 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.77□□□□□ -1.33
HTTP42858 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.77□□□□□ -1.33
HTTP42858 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HTTP42858 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HTTP42858 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.77□□□□□ -1.33
HTTP42858 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
HTTP42858 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.77□□□□□ -1.33
HTTP42858 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HTTP42858 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HTTP42858 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC6.77□□□□□ -1.33
HTTP42858 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
HTTP42858 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
HTTP42858 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 AC245047.5-201ENST00000437312 556 ntBASIC6.76□□□□□ -1.33
HTTP42858 AC100832.1-201ENST00000471945 383 ntBASIC6.76□□□□□ -1.33
HTTP42858 RPS4XP1-201ENST00000482189 787 ntBASIC6.76□□□□□ -1.33
HTTP42858 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.76□□□□□ -1.33
HTTP42858 AP004607.2-201ENST00000533949 322 ntBASIC6.76□□□□□ -1.33
HTTP42858 AC133644.2-201ENST00000608142 540 ntBASIC6.76□□□□□ -1.33
HTTP42858 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.76□□□□□ -1.33
HTTP42858 NEK2P4-201ENST00000425793 1329 ntBASIC6.76□□□□□ -1.33
HTTP42858 AL512310.3-201ENST00000547023 1335 ntBASIC6.76□□□□□ -1.33
HTTP42858 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
HTTP42858 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
HTTP42858 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
HTTP42858 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
HTTP42858 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.76□□□□□ -1.33
HTTP42858 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.76□□□□□ -1.33
HTTP42858 SRSF1P1-201ENST00000424058 520 ntBASIC6.76□□□□□ -1.33
HTTP42858 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC6.76□□□□□ -1.33
HTTP42858 AL049779.2-201ENST00000553847 315 ntBASIC6.76□□□□□ -1.33
HTTP42858 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.76□□□□□ -1.33
HTTP42858 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HTTP42858 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HTTP42858 CTAGE11P-201ENST00000451540 2353 ntBASIC6.76□□□□□ -1.33
HTTP42858 GNL2P1-201ENST00000451274 2190 ntBASIC6.76□□□□□ -1.33
HTTP42858 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms