Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.68□□□□□ -1.34
HMGA1P17096 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HMGA1P17096 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGA1P17096 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.68□□□□□ -1.34
HMGA1P17096 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGA1P17096 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGA1P17096 AC069154.1-201ENST00000432914 542 ntBASIC6.68□□□□□ -1.34
HMGA1P17096 PNKDP1-201ENST00000435914 430 ntBASIC6.68□□□□□ -1.34
HMGA1P17096 AC110602.1-201ENST00000437414 318 ntBASIC6.68□□□□□ -1.34
HMGA1P17096 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGA1P17096 RPS10P18-201ENST00000442662 495 ntBASIC6.68□□□□□ -1.34
HMGA1P17096 HMGN1P2-201ENST00000445197 310 ntBASIC6.68□□□□□ -1.34
HMGA1P17096 AL590004.3-202ENST00000445883 451 ntBASIC6.68□□□□□ -1.34
HMGA1P17096 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.68□□□□□ -1.34
HMGA1P17096 RPL12P30-201ENST00000488389 499 ntBASIC6.68□□□□□ -1.34
HMGA1P17096 OR7E99P-201ENST00000505750 922 ntBASIC6.68□□□□□ -1.34
HMGA1P17096 OR4D12P-201ENST00000509361 911 ntBASIC6.68□□□□□ -1.34
HMGA1P17096 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGA1P17096 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.68□□□□□ -1.34
HMGA1P17096 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.68□□□□□ -1.34
HMGA1P17096 AL078623.1-201ENST00000602702 907 ntBASIC6.68□□□□□ -1.34
HMGA1P17096 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.68□□□□□ -1.34
HMGA1P17096 AL359742.1-201ENST00000622497 540 ntBASIC6.68□□□□□ -1.34
HMGA1P17096 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.68□□□□□ -1.34
HMGA1P17096 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGA1P17096 AC011455.2-201ENST00000599320 3336 ntBASIC6.68□□□□□ -1.34
HMGA1P17096 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.68□□□□□ -1.34
HMGA1P17096 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.68□□□□□ -1.34
HMGA1P17096 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMGA1P17096 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.68□□□□□ -1.34
HMGA1P17096 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.68□□□□□ -1.34
HMGA1P17096 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.68□□□□□ -1.34
HMGA1P17096 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
HMGA1P17096 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
HMGA1P17096 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HMGA1P17096 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 RN7SKP15-201ENST00000364742 309 ntBASIC6.67□□□□□ -1.34
HMGA1P17096 SNORA77.2-201ENST00000408571 112 ntBASIC6.67□□□□□ -1.34
HMGA1P17096 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.67□□□□□ -1.34
HMGA1P17096 AC115283.1-201ENST00000427353 400 ntBASIC6.67□□□□□ -1.34
HMGA1P17096 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.67□□□□□ -1.34
HMGA1P17096 AMYP1-201ENST00000440059 1023 ntBASIC6.67□□□□□ -1.34
HMGA1P17096 OR52I1-201ENST00000450052 1050 ntBASIC6.67□□□□□ -1.34
HMGA1P17096 AL133351.3-201ENST00000454998 193 ntBASIC6.67□□□□□ -1.34
HMGA1P17096 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.67□□□□□ -1.34
HMGA1P17096 RPL12P24-201ENST00000474907 486 ntBASIC6.67□□□□□ -1.34
HMGA1P17096 AP002453.1-201ENST00000492327 668 ntBASIC6.67□□□□□ -1.34
HMGA1P17096 SNX18P24-201ENST00000505249 671 ntBASIC6.67□□□□□ -1.34
HMGA1P17096 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.67□□□□□ -1.34
HMGA1P17096 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.67□□□□□ -1.34
HMGA1P17096 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.67□□□□□ -1.34
HMGA1P17096 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.67□□□□□ -1.34
HMGA1P17096 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.67□□□□□ -1.34
HMGA1P17096 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.67□□□□□ -1.34
HMGA1P17096 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.67□□□□□ -1.34
HMGA1P17096 NDUFA5P11-201ENST00000567995 343 ntBASIC6.67□□□□□ -1.34
HMGA1P17096 OR7A11P-201ENST00000597719 953 ntBASIC6.67□□□□□ -1.34
HMGA1P17096 AC079315.1-201ENST00000602952 623 ntBASIC6.67□□□□□ -1.34
HMGA1P17096 AC091167.5-201ENST00000605689 894 ntBASIC6.67□□□□□ -1.34
HMGA1P17096 AC025262.3-201ENST00000623666 360 ntBASIC6.67□□□□□ -1.34
HMGA1P17096 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.67□□□□□ -1.34
HMGA1P17096 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.67□□□□□ -1.34
HMGA1P17096 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.67□□□□□ -1.34
HMGA1P17096 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.67□□□□□ -1.34
HMGA1P17096 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGA1P17096 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HMGA1P17096 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HMGA1P17096 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HMGA1P17096 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGA1P17096 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGA1P17096 OR2AH1P-202ENST00000641232 2744 ntBASIC6.66□□□□□ -1.34
HMGA1P17096 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGA1P17096 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
HMGA1P17096 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGA1P17096 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGA1P17096 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGA1P17096 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.66□□□□□ -1.34
HMGA1P17096 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HMGA1P17096 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
HMGA1P17096 RNA5SP110-201ENST00000362638 115 ntBASIC6.66□□□□□ -1.34
HMGA1P17096 RN7SKP275-201ENST00000364626 301 ntBASIC6.66□□□□□ -1.34
HMGA1P17096 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.66□□□□□ -1.34
HMGA1P17096 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
HMGA1P17096 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.66□□□□□ -1.34
HMGA1P17096 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
HMGA1P17096 RPS7P14-201ENST00000426405 583 ntBASIC6.66□□□□□ -1.34
HMGA1P17096 AC079807.1-201ENST00000429993 481 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms