Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MRPL57P6-201ENST00000506570 309 ntBASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 AC026700.1-201ENST00000512074 544 ntBASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 AC008429.4-201ENST00000521201 182 ntBASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 AC044860.3-201ENST00000559957 368 ntBASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 NPM1P42-201ENST00000560329 862 ntBASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 AF186192.2-204ENST00000581667 524 ntBASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 AL356986.1-201ENST00000604085 341 ntBASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 BX005195.1-201ENST00000618097 1198 ntBASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 AC110769.3-201ENST00000624567 1173 ntBASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 OR7E161P-202ENST00000641994 1033 ntBASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.11□□□□□ -1.59
RBFOX3A6NFN3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 RNU1-55P-201ENST00000365510 158 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 PPIAP26-201ENST00000377951 522 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 CLCN3P1-201ENST00000423965 1017 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 CHCHD3P1-201ENST00000425516 676 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AL590399.4-201ENST00000436561 601 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC013429.1-201ENST00000456604 422 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 RPS4XP19-201ENST00000460237 736 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 RPS2P45-201ENST00000469997 2057 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AL035690.1-201ENST00000490892 383 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 RN7SL518P-201ENST00000491887 280 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC107956.2-201ENST00000496042 454 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 ADI1P2-201ENST00000514945 429 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 NATP-201ENST00000523491 878 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC087257.2-201ENST00000538759 928 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AL121579.2-201ENST00000555466 590 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC116667.2-201ENST00000641075 823 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 AC092692.1-201ENST00000623625 2595 ntBASIC5.1□□□□□ -1.59
RBFOX3A6NFN3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.09□□□□□ -1.59
RBFOX3A6NFN3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms