Protein–RNA interactions for Protein: Q9Y6X0

SETBP1, SET-binding protein, humanhuman

Predictions only

Length 1,596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETBP1Q9Y6X0 LINC00565-201ENST00000562710 2331 ntBASIC28.25■■■□□ 2.11
SETBP1Q9Y6X0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SETBP1Q9Y6X0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC28.24■■■□□ 2.11
SETBP1Q9Y6X0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SETBP1Q9Y6X0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
SETBP1Q9Y6X0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
SETBP1Q9Y6X0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SETBP1Q9Y6X0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
SETBP1Q9Y6X0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SETBP1Q9Y6X0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC28.24■■■□□ 2.11
SETBP1Q9Y6X0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SETBP1Q9Y6X0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC28.24■■■□□ 2.11
SETBP1Q9Y6X0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
SETBP1Q9Y6X0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
SETBP1Q9Y6X0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SETBP1Q9Y6X0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
SETBP1Q9Y6X0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
SETBP1Q9Y6X0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC28.23■■■□□ 2.11
SETBP1Q9Y6X0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC28.23■■■□□ 2.11
SETBP1Q9Y6X0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SETBP1Q9Y6X0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 WWC2-AS2-201ENST00000578387 2183 ntBASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 EGLN1P1-201ENST00000531623 762 ntBASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SETBP1Q9Y6X0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC28.21■■■□□ 2.11
SETBP1Q9Y6X0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
SETBP1Q9Y6X0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC28.21■■■□□ 2.11
SETBP1Q9Y6X0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC28.21■■■□□ 2.11
SETBP1Q9Y6X0 KRT8P17-201ENST00000453110 1448 ntBASIC28.21■■■□□ 2.11
SETBP1Q9Y6X0 AC011506.1-201ENST00000474329 610 ntBASIC28.21■■■□□ 2.11
SETBP1Q9Y6X0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
SETBP1Q9Y6X0 KRT18P16-201ENST00000510337 1294 ntBASIC28.21■■■□□ 2.11
SETBP1Q9Y6X0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SETBP1Q9Y6X0 AC116351.2-201ENST00000606540 1585 ntBASIC28.21■■■□□ 2.11
SETBP1Q9Y6X0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC28.21■■■□□ 2.11
SETBP1Q9Y6X0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SETBP1Q9Y6X0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
SETBP1Q9Y6X0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
SETBP1Q9Y6X0 AC007225.1-201ENST00000566331 1836 ntBASIC28.2■■■□□ 2.11
SETBP1Q9Y6X0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SETBP1Q9Y6X0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SETBP1Q9Y6X0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC28.2■■■□□ 2.11
SETBP1Q9Y6X0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC28.2■■■□□ 2.11
SETBP1Q9Y6X0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SETBP1Q9Y6X0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SETBP1Q9Y6X0 ECEL1P2-202ENST00000465689 757 ntBASIC28.2■■■□□ 2.11
SETBP1Q9Y6X0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC28.2■■■□□ 2.11
SETBP1Q9Y6X0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SETBP1Q9Y6X0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SETBP1Q9Y6X0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SETBP1Q9Y6X0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SETBP1Q9Y6X0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SETBP1Q9Y6X0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SETBP1Q9Y6X0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SETBP1Q9Y6X0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC28.2■■■□□ 2.1
SETBP1Q9Y6X0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
SETBP1Q9Y6X0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC28.2■■■□□ 2.1
SETBP1Q9Y6X0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SETBP1Q9Y6X0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC28.19■■■□□ 2.1
SETBP1Q9Y6X0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC28.19■■■□□ 2.1
SETBP1Q9Y6X0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SETBP1Q9Y6X0 AP006587.1-201ENST00000534129 1502 ntBASIC28.19■■■□□ 2.1
SETBP1Q9Y6X0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC28.19■■■□□ 2.1
SETBP1Q9Y6X0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
SETBP1Q9Y6X0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC28.19■■■□□ 2.1
SETBP1Q9Y6X0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC28.19■■■□□ 2.1
SETBP1Q9Y6X0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC28.19■■■□□ 2.1
SETBP1Q9Y6X0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC28.19■■■□□ 2.1
SETBP1Q9Y6X0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC28.18■■■□□ 2.1
SETBP1Q9Y6X0 FP700111.2-201ENST00000619190 1892 ntBASIC28.18■■■□□ 2.1
SETBP1Q9Y6X0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
SETBP1Q9Y6X0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
SETBP1Q9Y6X0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
SETBP1Q9Y6X0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SETBP1Q9Y6X0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC28.18■■■□□ 2.1
SETBP1Q9Y6X0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SETBP1Q9Y6X0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC28.18■■■□□ 2.1
SETBP1Q9Y6X0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC28.18■■■□□ 2.1
SETBP1Q9Y6X0 DPP3P2-201ENST00000416030 1696 ntBASIC28.18■■■□□ 2.1
SETBP1Q9Y6X0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
SETBP1Q9Y6X0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SETBP1Q9Y6X0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC28.17■■■□□ 2.1
SETBP1Q9Y6X0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
SETBP1Q9Y6X0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SETBP1Q9Y6X0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SETBP1Q9Y6X0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SETBP1Q9Y6X0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC28.17■■■□□ 2.1
SETBP1Q9Y6X0 AC063952.2-201ENST00000498792 1227 ntBASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms