Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 TUBB8P6-201ENST00000436895 1288 ntBASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 WWOX-216ENST00000569818 525 ntBASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 AC007225.1-201ENST00000566331 1836 ntBASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 RCC2P6-201ENST00000526625 1557 ntBASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.86■■□□□ 1.09
SCN10AQ9Y5Y9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 AL137013.1-201ENST00000432946 1228 ntBASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 AC104076.2-201ENST00000448912 469 ntBASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 AC010203.1-204ENST00000548782 407 ntBASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SCN10AQ9Y5Y9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 AC096733.2-201ENST00000609937 1394 ntBASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCN10AQ9Y5Y9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCN10AQ9Y5Y9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SCN10AQ9Y5Y9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.83■■□□□ 1.09
SCN10AQ9Y5Y9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.83■■□□□ 1.09
SCN10AQ9Y5Y9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCN10AQ9Y5Y9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
SCN10AQ9Y5Y9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCN10AQ9Y5Y9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.83■■□□□ 1.09
SCN10AQ9Y5Y9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
SCN10AQ9Y5Y9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCN10AQ9Y5Y9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SCN10AQ9Y5Y9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SCN10AQ9Y5Y9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SCN10AQ9Y5Y9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.83■■□□□ 1.08
SCN10AQ9Y5Y9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.83■■□□□ 1.08
SCN10AQ9Y5Y9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SCN10AQ9Y5Y9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.83■■□□□ 1.08
SCN10AQ9Y5Y9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SCN10AQ9Y5Y9 AC022616.7-201ENST00000525383 220 ntBASIC21.83■■□□□ 1.08
SCN10AQ9Y5Y9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.83■■□□□ 1.08
SCN10AQ9Y5Y9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
SCN10AQ9Y5Y9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.83■■□□□ 1.08
SCN10AQ9Y5Y9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.83■■□□□ 1.08
SCN10AQ9Y5Y9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SCN10AQ9Y5Y9 KRT16P6-202ENST00000425692 1426 ntBASIC21.82■■□□□ 1.08
SCN10AQ9Y5Y9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCN10AQ9Y5Y9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCN10AQ9Y5Y9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCN10AQ9Y5Y9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.82■■□□□ 1.08
SCN10AQ9Y5Y9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCN10AQ9Y5Y9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms