Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
NINLQ9Y2I6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC27.23■■□□□ 1.95
NINLQ9Y2I6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
NINLQ9Y2I6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NINLQ9Y2I6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
NINLQ9Y2I6 KSR1P1-201ENST00000446298 240 ntBASIC27.22■■□□□ 1.95
NINLQ9Y2I6 AP002982.1-201ENST00000492365 877 ntBASIC27.22■■□□□ 1.95
NINLQ9Y2I6 NUDT16P1-203ENST00000513809 620 ntBASIC27.22■■□□□ 1.95
NINLQ9Y2I6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC27.22■■□□□ 1.95
NINLQ9Y2I6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC27.21■■□□□ 1.95
NINLQ9Y2I6 AC020907.5-201ENST00000624372 1936 ntBASIC27.21■■□□□ 1.95
NINLQ9Y2I6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC27.21■■□□□ 1.95
NINLQ9Y2I6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
NINLQ9Y2I6 SMG8-203ENST00000578922 2178 ntBASIC27.21■■□□□ 1.95
NINLQ9Y2I6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
NINLQ9Y2I6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
NINLQ9Y2I6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
NINLQ9Y2I6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC27.21■■□□□ 1.95
NINLQ9Y2I6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
NINLQ9Y2I6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
NINLQ9Y2I6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
NINLQ9Y2I6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
NINLQ9Y2I6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC27.21■■□□□ 1.95
NINLQ9Y2I6 AC026271.3-201ENST00000571884 352 ntBASIC27.21■■□□□ 1.95
NINLQ9Y2I6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC27.21■■□□□ 1.95
NINLQ9Y2I6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
NINLQ9Y2I6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC27.2■■□□□ 1.95
NINLQ9Y2I6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
NINLQ9Y2I6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC27.2■■□□□ 1.94
NINLQ9Y2I6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
NINLQ9Y2I6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
NINLQ9Y2I6 FAM197Y1-201ENST00000421178 764 ntBASIC27.2■■□□□ 1.94
NINLQ9Y2I6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC27.2■■□□□ 1.94
NINLQ9Y2I6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
NINLQ9Y2I6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC27.2■■□□□ 1.94
NINLQ9Y2I6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
NINLQ9Y2I6 AP003071.4-201ENST00000562276 1284 ntBASIC27.2■■□□□ 1.94
NINLQ9Y2I6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
NINLQ9Y2I6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.94
NINLQ9Y2I6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC27.2■■□□□ 1.94
NINLQ9Y2I6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
NINLQ9Y2I6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
NINLQ9Y2I6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
NINLQ9Y2I6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
NINLQ9Y2I6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
NINLQ9Y2I6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
NINLQ9Y2I6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
NINLQ9Y2I6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
NINLQ9Y2I6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
NINLQ9Y2I6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC27.19■■□□□ 1.94
NINLQ9Y2I6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
NINLQ9Y2I6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC27.19■■□□□ 1.94
NINLQ9Y2I6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC27.19■■□□□ 1.94
NINLQ9Y2I6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC27.19■■□□□ 1.94
NINLQ9Y2I6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC27.19■■□□□ 1.94
NINLQ9Y2I6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
NINLQ9Y2I6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
NINLQ9Y2I6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
NINLQ9Y2I6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
NINLQ9Y2I6 KRT16P1-201ENST00000399124 1418 ntBASIC27.17■■□□□ 1.94
NINLQ9Y2I6 AP005212.1-201ENST00000581547 1997 ntBASIC27.17■■□□□ 1.94
NINLQ9Y2I6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
NINLQ9Y2I6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC27.17■■□□□ 1.94
NINLQ9Y2I6 AL445675.2-201ENST00000620291 557 ntBASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms