Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX43Q9NXZ2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.16■□□□□ 0.98
DDX43Q9NXZ2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 AL512408.1-201ENST00000569378 2000 ntBASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
DDX43Q9NXZ2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
DDX43Q9NXZ2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 RPS2P4-201ENST00000476944 856 ntBASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 BX119927.1-201ENST00000636596 1552 ntBASIC21.14■□□□□ 0.97
DDX43Q9NXZ2 NBPF21P-201ENST00000425093 1451 ntBASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 GABARAPL3-202ENST00000624044 1851 ntBASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX43Q9NXZ2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX43Q9NXZ2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms