Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPF1Q9NWY4 AC093827.2-201ENST00000512654 315 ntBASIC18.39■□□□□ 0.53
HPF1Q9NWY4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPF1Q9NWY4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.39■□□□□ 0.53
HPF1Q9NWY4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPF1Q9NWY4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HPF1Q9NWY4 MTDHP1-201ENST00000605323 784 ntBASIC18.39■□□□□ 0.53
HPF1Q9NWY4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.39■□□□□ 0.53
HPF1Q9NWY4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HPF1Q9NWY4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
HPF1Q9NWY4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.39■□□□□ 0.53
HPF1Q9NWY4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HPF1Q9NWY4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HPF1Q9NWY4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HPF1Q9NWY4 KRT8P17-201ENST00000453110 1448 ntBASIC18.39■□□□□ 0.53
HPF1Q9NWY4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.39■□□□□ 0.53
HPF1Q9NWY4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 AC239809.2-201ENST00000415381 517 ntBASIC18.38■□□□□ 0.53
HPF1Q9NWY4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 AL023875.1-201ENST00000640777 796 ntBASIC18.38■□□□□ 0.53
HPF1Q9NWY4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HPF1Q9NWY4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HPF1Q9NWY4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 AC007952.6-201ENST00000573168 2673 ntBASIC18.36■□□□□ 0.53
HPF1Q9NWY4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 AL121906.2-201ENST00000621597 723 ntBASIC18.36■□□□□ 0.53
HPF1Q9NWY4 AC003957.1-201ENST00000625108 2673 ntBASIC18.36■□□□□ 0.53
HPF1Q9NWY4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HPF1Q9NWY4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HPF1Q9NWY4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms