Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HCFC1R1Q9NWW0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 ARMC10P1-201ENST00000313754 855 ntBASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HCFC1R1Q9NWW0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 TERF1P1-201ENST00000311003 1181 ntBASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 KRT18P22-201ENST00000402024 1347 ntBASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 AC092720.2-201ENST00000602388 1665 ntBASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HCFC1R1Q9NWW0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 KRT16P6-202ENST00000425692 1426 ntBASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 AL445675.2-201ENST00000620291 557 ntBASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 AC079834.2-201ENST00000609776 1949 ntBASIC20.65■□□□□ 0.9
HCFC1R1Q9NWW0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
HCFC1R1Q9NWW0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HCFC1R1Q9NWW0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.64■□□□□ 0.89
HCFC1R1Q9NWW0 SLC25A3P1-201ENST00000443844 931 ntBASIC20.64■□□□□ 0.89
HCFC1R1Q9NWW0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.64■□□□□ 0.89
HCFC1R1Q9NWW0 AC011506.1-201ENST00000474329 610 ntBASIC20.64■□□□□ 0.89
HCFC1R1Q9NWW0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HCFC1R1Q9NWW0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.64■□□□□ 0.89
HCFC1R1Q9NWW0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.64■□□□□ 0.89
HCFC1R1Q9NWW0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.64■□□□□ 0.89
HCFC1R1Q9NWW0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.64■□□□□ 0.89
HCFC1R1Q9NWW0 FSCN1P1-201ENST00000568912 1481 ntBASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 AL137013.1-201ENST00000432946 1228 ntBASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 YBX1P10-201ENST00000444752 975 ntBASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 KRT18P16-201ENST00000510337 1294 ntBASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms