Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 SOX15-203ENST00000570788 1093 ntBASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PARPBPQ9NWS1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 AC026366.1-201ENST00000488803 879 ntBASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PARPBPQ9NWS1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 AL391422.3-201ENST00000603791 2761 ntBASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 FAM201B-201ENST00000458407 597 ntBASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 AP003097.1-201ENST00000530657 1135 ntBASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 AC008687.6-201ENST00000596318 630 ntBASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 AC006557.6-201ENST00000623071 864 ntBASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PARPBPQ9NWS1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PARPBPQ9NWS1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PARPBPQ9NWS1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 KRT17P3-201ENST00000420566 1262 ntBASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 AC120498.8-201ENST00000614275 531 ntBASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PARPBPQ9NWS1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PARPBPQ9NWS1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms