Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZCCHC3Q9NUD5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZCCHC3Q9NUD5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.64■□□□□ 0.57
ZCCHC3Q9NUD5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZCCHC3Q9NUD5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.64■□□□□ 0.57
ZCCHC3Q9NUD5 AL121832.2-201ENST00000610979 668 ntBASIC18.64■□□□□ 0.57
ZCCHC3Q9NUD5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZCCHC3Q9NUD5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZCCHC3Q9NUD5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.64■□□□□ 0.57
ZCCHC3Q9NUD5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZCCHC3Q9NUD5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ZCCHC3Q9NUD5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 AL158211.5-201ENST00000623583 2518 ntBASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZCCHC3Q9NUD5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZCCHC3Q9NUD5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.62■□□□□ 0.57
ZCCHC3Q9NUD5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZCCHC3Q9NUD5 AC083906.2-201ENST00000511578 360 ntBASIC18.62■□□□□ 0.57
ZCCHC3Q9NUD5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZCCHC3Q9NUD5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZCCHC3Q9NUD5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.62■□□□□ 0.57
ZCCHC3Q9NUD5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZCCHC3Q9NUD5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZCCHC3Q9NUD5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.62■□□□□ 0.57
ZCCHC3Q9NUD5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZCCHC3Q9NUD5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.62■□□□□ 0.57
ZCCHC3Q9NUD5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZCCHC3Q9NUD5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZCCHC3Q9NUD5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 AC009237.14-201ENST00000609975 1594 ntBASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 GPX1P1-201ENST00000388829 606 ntBASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.61■□□□□ 0.57
ZCCHC3Q9NUD5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 MIPEPP3-201ENST00000412105 444 ntBASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZCCHC3Q9NUD5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms