Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 AC092667.1-201ENST00000434301 2586 ntBASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 ESRRAP1-201ENST00000400596 1257 ntBASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SDHAF3Q9NRP4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 POM121L13P-201ENST00000422362 380 ntBASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.19■□□□□ 0.5
SDHAF3Q9NRP4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 RPS2P52-201ENST00000469610 820 ntBASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SDHAF3Q9NRP4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 POU5F1P3-201ENST00000428824 1078 ntBASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SDHAF3Q9NRP4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SDHAF3Q9NRP4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHAF3Q9NRP4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHAF3Q9NRP4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.16■□□□□ 0.5
SDHAF3Q9NRP4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.16■□□□□ 0.5
SDHAF3Q9NRP4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SDHAF3Q9NRP4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SDHAF3Q9NRP4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.16■□□□□ 0.5
SDHAF3Q9NRP4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms