Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HINT3Q9NQE9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 CDCA4P2-201ENST00000441182 718 ntBASIC17.9■□□□□ 0.46
HINT3Q9NQE9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 AC026185.1-201ENST00000445748 174 ntBASIC17.9■□□□□ 0.46
HINT3Q9NQE9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 AC010536.3-201ENST00000620306 533 ntBASIC17.9■□□□□ 0.46
HINT3Q9NQE9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 AC004408.2-201ENST00000623613 2777 ntBASIC17.9■□□□□ 0.46
HINT3Q9NQE9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HINT3Q9NQE9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HINT3Q9NQE9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HINT3Q9NQE9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.89■□□□□ 0.45
HINT3Q9NQE9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 Z82202.1-201ENST00000623446 1880 ntBASIC17.88■□□□□ 0.45
HINT3Q9NQE9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.88■□□□□ 0.45
HINT3Q9NQE9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 DUX4L16-201ENST00000555130 1264 ntBASIC17.88■□□□□ 0.45
HINT3Q9NQE9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 AL591742.1-201ENST00000604433 565 ntBASIC17.88■□□□□ 0.45
HINT3Q9NQE9 AC231657.2-201ENST00000624556 255 ntBASIC17.88■□□□□ 0.45
HINT3Q9NQE9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HINT3Q9NQE9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 AC007322.1-201ENST00000426983 750 ntBASIC17.87■□□□□ 0.45
HINT3Q9NQE9 TERF1P5-201ENST00000477545 1207 ntBASIC17.87■□□□□ 0.45
HINT3Q9NQE9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 RAP2CP1-201ENST00000605103 478 ntBASIC17.87■□□□□ 0.45
HINT3Q9NQE9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HINT3Q9NQE9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms