Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS11Q9H270 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VPS11Q9H270 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
VPS11Q9H270 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.93■□□□□ 0.78
VPS11Q9H270 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
VPS11Q9H270 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VPS11Q9H270 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS11Q9H270 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.93■□□□□ 0.78
VPS11Q9H270 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS11Q9H270 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS11Q9H270 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS11Q9H270 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
VPS11Q9H270 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS11Q9H270 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS11Q9H270 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS11Q9H270 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
VPS11Q9H270 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS11Q9H270 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.92■□□□□ 0.78
VPS11Q9H270 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.92■□□□□ 0.78
VPS11Q9H270 TERF1P5-201ENST00000477545 1207 ntBASIC19.92■□□□□ 0.78
VPS11Q9H270 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.92■□□□□ 0.78
VPS11Q9H270 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS11Q9H270 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS11Q9H270 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS11Q9H270 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS11Q9H270 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
VPS11Q9H270 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VPS11Q9H270 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS11Q9H270 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VPS11Q9H270 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.92■□□□□ 0.78
VPS11Q9H270 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS11Q9H270 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS11Q9H270 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
VPS11Q9H270 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.92■□□□□ 0.78
VPS11Q9H270 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VPS11Q9H270 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS11Q9H270 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS11Q9H270 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS11Q9H270 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS11Q9H270 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS11Q9H270 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS11Q9H270 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
VPS11Q9H270 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS11Q9H270 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS11Q9H270 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS11Q9H270 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS11Q9H270 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.91■□□□□ 0.78
VPS11Q9H270 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS11Q9H270 AL591742.1-201ENST00000604433 565 ntBASIC19.91■□□□□ 0.78
VPS11Q9H270 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS11Q9H270 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS11Q9H270 CYP21A1P-202ENST00000354927 1481 ntBASIC19.91■□□□□ 0.78
VPS11Q9H270 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS11Q9H270 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
VPS11Q9H270 AC120498.9-201ENST00000339021 3867 ntBASIC19.91■□□□□ 0.78
VPS11Q9H270 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS11Q9H270 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS11Q9H270 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS11Q9H270 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS11Q9H270 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS11Q9H270 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS11Q9H270 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS11Q9H270 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VPS11Q9H270 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
VPS11Q9H270 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS11Q9H270 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.9■□□□□ 0.78
VPS11Q9H270 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VPS11Q9H270 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS11Q9H270 AC010536.3-201ENST00000620306 533 ntBASIC19.9■□□□□ 0.78
VPS11Q9H270 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS11Q9H270 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS11Q9H270 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS11Q9H270 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS11Q9H270 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS11Q9H270 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS11Q9H270 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS11Q9H270 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS11Q9H270 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS11Q9H270 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS11Q9H270 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.9■□□□□ 0.78
VPS11Q9H270 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS11Q9H270 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS11Q9H270 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS11Q9H270 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS11Q9H270 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS11Q9H270 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS11Q9H270 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.89■□□□□ 0.77
VPS11Q9H270 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS11Q9H270 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.89■□□□□ 0.77
VPS11Q9H270 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.89■□□□□ 0.77
VPS11Q9H270 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
VPS11Q9H270 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
VPS11Q9H270 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.89■□□□□ 0.77
VPS11Q9H270 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS11Q9H270 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS11Q9H270 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS11Q9H270 AC093503.3-201ENST00000624917 2352 ntBASIC19.88■□□□□ 0.77
VPS11Q9H270 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VPS11Q9H270 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VPS11Q9H270 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms