Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 AC133552.2-202ENST00000575694 574 ntBASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.45■□□□□ 0.86
FOXP3Q9BZS1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 TERF1P5-201ENST00000477545 1207 ntBASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 AL356652.1-201ENST00000615962 565 ntBASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 AC013268.1-206ENST00000638368 961 ntBASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 AC112229.1-201ENST00000639295 961 ntBASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 TNXA-203ENST00000507684 2038 ntBASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 AC087633.2-202ENST00000565166 1439 ntBASIC20.44■□□□□ 0.86
FOXP3Q9BZS1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 AP000974.1-201ENST00000623909 2387 ntBASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 Z82202.1-201ENST00000623446 1880 ntBASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXP3Q9BZS1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 CYP2T1P-201ENST00000432607 1285 ntBASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 AC133041.1-202ENST00000642053 222 ntBASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
FOXP3Q9BZS1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 AC068338.2-201ENST00000563278 1430 ntBASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
FOXP3Q9BZS1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
FOXP3Q9BZS1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms