Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.76■□□□□ 0.91
LRRC3Q9BY71 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC3Q9BY71 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LRRC3Q9BY71 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC3Q9BY71 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC3Q9BY71 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC3Q9BY71 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC3Q9BY71 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC3Q9BY71 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC3Q9BY71 NIFKP9-201ENST00000419265 221 ntBASIC20.75■□□□□ 0.91
LRRC3Q9BY71 RBM17P1-201ENST00000453646 1190 ntBASIC20.75■□□□□ 0.91
LRRC3Q9BY71 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRC3Q9BY71 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.75■□□□□ 0.91
LRRC3Q9BY71 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.75■□□□□ 0.91
LRRC3Q9BY71 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC3Q9BY71 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
LRRC3Q9BY71 AC079598.2-202ENST00000546624 1451 ntBASIC20.75■□□□□ 0.91
LRRC3Q9BY71 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.75■□□□□ 0.91
LRRC3Q9BY71 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.74■□□□□ 0.91
LRRC3Q9BY71 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC3Q9BY71 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC3Q9BY71 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC3Q9BY71 MMP23A-201ENST00000234610 1017 ntBASIC20.74■□□□□ 0.91
LRRC3Q9BY71 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC3Q9BY71 KRT18P21-201ENST00000515767 1272 ntBASIC20.74■□□□□ 0.91
LRRC3Q9BY71 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC3Q9BY71 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC3Q9BY71 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC3Q9BY71 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.74■□□□□ 0.91
LRRC3Q9BY71 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC3Q9BY71 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC3Q9BY71 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.74■□□□□ 0.91
LRRC3Q9BY71 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LRRC3Q9BY71 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 AC116351.2-201ENST00000606540 1585 ntBASIC20.73■□□□□ 0.91
LRRC3Q9BY71 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 KSR1P1-201ENST00000446298 240 ntBASIC20.73■□□□□ 0.91
LRRC3Q9BY71 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC3Q9BY71 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 TFP1-202ENST00000475455 1573 ntBASIC20.72■□□□□ 0.91
LRRC3Q9BY71 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 RCN1P1-201ENST00000400413 996 ntBASIC20.72■□□□□ 0.91
LRRC3Q9BY71 MIR1224-201ENST00000408193 85 ntBASIC20.72■□□□□ 0.91
LRRC3Q9BY71 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 AC116562.2-201ENST00000507042 360 ntBASIC20.72■□□□□ 0.91
LRRC3Q9BY71 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
LRRC3Q9BY71 KRT8P9-201ENST00000558927 1449 ntBASIC20.71■□□□□ 0.91
LRRC3Q9BY71 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC3Q9BY71 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC3Q9BY71 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.71■□□□□ 0.91
LRRC3Q9BY71 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC3Q9BY71 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC3Q9BY71 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC3Q9BY71 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.71■□□□□ 0.91
LRRC3Q9BY71 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC3Q9BY71 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC3Q9BY71 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
LRRC3Q9BY71 AC092720.2-201ENST00000602388 1665 ntBASIC20.7■□□□□ 0.91
LRRC3Q9BY71 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRC3Q9BY71 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC3Q9BY71 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC3Q9BY71 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC3Q9BY71 CR392000.1-201ENST00000624770 1228 ntBASIC20.7■□□□□ 0.9
LRRC3Q9BY71 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRC3Q9BY71 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC3Q9BY71 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRC3Q9BY71 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC3Q9BY71 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC3Q9BY71 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms