Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 AC091304.2-201ENST00000564639 760 ntBASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LRFN3Q9BTN0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 LINC01711-201ENST00000598340 967 ntBASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 AC016734.2-201ENST00000624325 1377 ntBASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.94■□□□□ 0.78
LRFN3Q9BTN0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 AL645929.1-201ENST00000420084 975 ntBASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRFN3Q9BTN0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 AP002383.4-201ENST00000442518 975 ntBASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 BX276092.5-203ENST00000456199 560 ntBASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 AL121672.3-201ENST00000608644 468 ntBASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 AL121772.3-201ENST00000610840 674 ntBASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LRFN3Q9BTN0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 AP000523.1-201ENST00000398242 1049 ntBASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LRFN3Q9BTN0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms