Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LITAFQ99732 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LITAFQ99732 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LITAFQ99732 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LITAFQ99732 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LITAFQ99732 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LITAFQ99732 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LITAFQ99732 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.21□□□□□ -0.29
LITAFQ99732 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LITAFQ99732 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
LITAFQ99732 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LITAFQ99732 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.21□□□□□ -0.29
LITAFQ99732 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LITAFQ99732 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC13.21□□□□□ -0.29
LITAFQ99732 SNX3-202ENST00000349379 890 ntTSL 2 BASIC13.21□□□□□ -0.29
LITAFQ99732 SERBP1P1-201ENST00000396021 1160 ntBASIC13.21□□□□□ -0.29
LITAFQ99732 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LITAFQ99732 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC13.21□□□□□ -0.29
LITAFQ99732 AC245052.3-201ENST00000450182 901 ntBASIC13.21□□□□□ -0.29
LITAFQ99732 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LITAFQ99732 AL031598.1-201ENST00000561511 1773 ntBASIC13.21□□□□□ -0.29
LITAFQ99732 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LITAFQ99732 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LITAFQ99732 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
LITAFQ99732 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
LITAFQ99732 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LITAFQ99732 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LITAFQ99732 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LITAFQ99732 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LITAFQ99732 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
LITAFQ99732 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
LITAFQ99732 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LITAFQ99732 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
LITAFQ99732 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.21□□□□□ -0.3
LITAFQ99732 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LITAFQ99732 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
LITAFQ99732 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC13.2□□□□□ -0.3
LITAFQ99732 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.2□□□□□ -0.3
LITAFQ99732 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.2□□□□□ -0.3
LITAFQ99732 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC13.2□□□□□ -0.3
LITAFQ99732 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LITAFQ99732 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 PTPA-214ENST00000423100 988 ntTSL 2 BASIC13.2□□□□□ -0.3
LITAFQ99732 SRD5A1P1-201ENST00000442297 786 ntBASIC13.2□□□□□ -0.3
LITAFQ99732 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC13.2□□□□□ -0.3
LITAFQ99732 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LITAFQ99732 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC13.2□□□□□ -0.3
LITAFQ99732 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC13.2□□□□□ -0.3
LITAFQ99732 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.2□□□□□ -0.3
LITAFQ99732 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LITAFQ99732 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.19□□□□□ -0.3
LITAFQ99732 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LITAFQ99732 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LITAFQ99732 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LITAFQ99732 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LITAFQ99732 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.19□□□□□ -0.3
LITAFQ99732 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LITAFQ99732 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LITAFQ99732 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.19□□□□□ -0.3
LITAFQ99732 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LITAFQ99732 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC13.19□□□□□ -0.3
LITAFQ99732 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC13.19□□□□□ -0.3
LITAFQ99732 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LITAFQ99732 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms