Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.73■□□□□ 0.59
COL21A1Q96P44 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.73■□□□□ 0.59
COL21A1Q96P44 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL21A1Q96P44 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.73■□□□□ 0.59
COL21A1Q96P44 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL21A1Q96P44 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL21A1Q96P44 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL21A1Q96P44 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL21A1Q96P44 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL21A1Q96P44 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL21A1Q96P44 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COL21A1Q96P44 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL21A1Q96P44 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL21A1Q96P44 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL21A1Q96P44 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL21A1Q96P44 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL21A1Q96P44 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.72■□□□□ 0.59
COL21A1Q96P44 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL21A1Q96P44 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL21A1Q96P44 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.72■□□□□ 0.59
COL21A1Q96P44 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL21A1Q96P44 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
COL21A1Q96P44 AC092118.2-201ENST00000613495 667 ntBASIC18.72■□□□□ 0.59
COL21A1Q96P44 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.72■□□□□ 0.59
COL21A1Q96P44 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.72■□□□□ 0.59
COL21A1Q96P44 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.72■□□□□ 0.59
COL21A1Q96P44 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.72■□□□□ 0.59
COL21A1Q96P44 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.72■□□□□ 0.59
COL21A1Q96P44 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.72■□□□□ 0.59
COL21A1Q96P44 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL21A1Q96P44 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
COL21A1Q96P44 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.72■□□□□ 0.59
COL21A1Q96P44 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL21A1Q96P44 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COL21A1Q96P44 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
COL21A1Q96P44 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.71■□□□□ 0.59
COL21A1Q96P44 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.71■□□□□ 0.59
COL21A1Q96P44 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
COL21A1Q96P44 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL21A1Q96P44 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL21A1Q96P44 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL21A1Q96P44 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.71■□□□□ 0.59
COL21A1Q96P44 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL21A1Q96P44 AL355802.2-201ENST00000402069 882 ntBASIC18.71■□□□□ 0.59
COL21A1Q96P44 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.71■□□□□ 0.59
COL21A1Q96P44 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.71■□□□□ 0.59
COL21A1Q96P44 AL138781.1-201ENST00000566567 1274 ntBASIC18.71■□□□□ 0.59
COL21A1Q96P44 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
COL21A1Q96P44 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL21A1Q96P44 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.71■□□□□ 0.59
COL21A1Q96P44 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL21A1Q96P44 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
COL21A1Q96P44 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL21A1Q96P44 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.71■□□□□ 0.59
COL21A1Q96P44 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.71■□□□□ 0.59
COL21A1Q96P44 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
COL21A1Q96P44 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL21A1Q96P44 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL21A1Q96P44 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL21A1Q96P44 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL21A1Q96P44 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COL21A1Q96P44 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL21A1Q96P44 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 AC142086.2-201ENST00000569753 217 ntBASIC18.7■□□□□ 0.58
COL21A1Q96P44 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL21A1Q96P44 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COL21A1Q96P44 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
COL21A1Q96P44 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL21A1Q96P44 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
COL21A1Q96P44 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL21A1Q96P44 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
COL21A1Q96P44 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL21A1Q96P44 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL21A1Q96P44 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL21A1Q96P44 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL21A1Q96P44 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL21A1Q96P44 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL21A1Q96P44 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COL21A1Q96P44 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL21A1Q96P44 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COL21A1Q96P44 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.69■□□□□ 0.58
COL21A1Q96P44 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL21A1Q96P44 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.69■□□□□ 0.58
COL21A1Q96P44 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL21A1Q96P44 AL691432.2-201ENST00000607222 2038 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms