Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 AC116351.2-201ENST00000606540 1585 ntBASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 AC097658.1-201ENST00000475555 843 ntBASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM5Q96HC4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PDLIM5Q96HC4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
PDLIM5Q96HC4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 HLA-B-256ENST00000639848 1089 ntBASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 AC018553.1-201ENST00000616682 1458 ntBASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM5Q96HC4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.38■□□□□ 0.69
PDLIM5Q96HC4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PDLIM5Q96HC4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms