Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 AC233263.1-201ENST00000578059 224 ntBASIC17.83■□□□□ 0.44
LRRC46Q96FV0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC46Q96FV0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 Z99916.2-201ENST00000604037 246 ntBASIC17.82■□□□□ 0.44
LRRC46Q96FV0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 AC006557.6-201ENST00000623071 864 ntBASIC17.82■□□□□ 0.44
LRRC46Q96FV0 AL023875.1-201ENST00000640777 796 ntBASIC17.82■□□□□ 0.44
LRRC46Q96FV0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC46Q96FV0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 RPS2P55-201ENST00000397318 883 ntBASIC17.81■□□□□ 0.44
LRRC46Q96FV0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 AC107956.1-201ENST00000494359 873 ntBASIC17.81■□□□□ 0.44
LRRC46Q96FV0 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 AC233702.5-201ENST00000584107 538 ntBASIC17.81■□□□□ 0.44
LRRC46Q96FV0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 AC124016.1-201ENST00000609552 612 ntBASIC17.81■□□□□ 0.44
LRRC46Q96FV0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC46Q96FV0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.8■□□□□ 0.44
LRRC46Q96FV0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 AC138932.1-201ENST00000534164 6830 ntBASIC17.8■□□□□ 0.44
LRRC46Q96FV0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 KRASP1-201ENST00000407852 552 ntBASIC17.8■□□□□ 0.44
LRRC46Q96FV0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.8■□□□□ 0.44
LRRC46Q96FV0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 MIR4785-201ENST00000585005 73 ntBASIC17.8■□□□□ 0.44
LRRC46Q96FV0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms