Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC39Q96DD0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 AC098818.2-201ENST00000564925 2320 ntBASIC20.03■□□□□ 0.8
LRRC39Q96DD0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.03■□□□□ 0.8
LRRC39Q96DD0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 C2orf69P4-201ENST00000565394 541 ntBASIC20.02■□□□□ 0.8
LRRC39Q96DD0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC39Q96DD0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC39Q96DD0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC39Q96DD0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC39Q96DD0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC39Q96DD0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.02■□□□□ 0.79
LRRC39Q96DD0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC39Q96DD0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
LRRC39Q96DD0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
LRRC39Q96DD0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC39Q96DD0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC39Q96DD0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC39Q96DD0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC39Q96DD0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC39Q96DD0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.01■□□□□ 0.79
LRRC39Q96DD0 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.01■□□□□ 0.79
LRRC39Q96DD0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC39Q96DD0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC39Q96DD0 AC010980.2-201ENST00000587099 1412 ntBASIC20.01■□□□□ 0.79
LRRC39Q96DD0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC39Q96DD0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20■□□□□ 0.79
LRRC39Q96DD0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20■□□□□ 0.79
LRRC39Q96DD0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC39Q96DD0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC39Q96DD0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRC39Q96DD0 AP000974.1-201ENST00000623909 2387 ntBASIC20■□□□□ 0.79
LRRC39Q96DD0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC39Q96DD0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
LRRC39Q96DD0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRC39Q96DD0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC39Q96DD0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC39Q96DD0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20■□□□□ 0.79
LRRC39Q96DD0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC39Q96DD0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20■□□□□ 0.79
LRRC39Q96DD0 AL512625.2-201ENST00000417533 625 ntBASIC20■□□□□ 0.79
LRRC39Q96DD0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20■□□□□ 0.79
LRRC39Q96DD0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20■□□□□ 0.79
LRRC39Q96DD0 BID-214ENST00000617586 542 ntTSL 5 BASIC20■□□□□ 0.79
LRRC39Q96DD0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20■□□□□ 0.79
LRRC39Q96DD0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC39Q96DD0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC39Q96DD0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
LRRC39Q96DD0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LRRC39Q96DD0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
LRRC39Q96DD0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20■□□□□ 0.79
LRRC39Q96DD0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC39Q96DD0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC39Q96DD0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC39Q96DD0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC39Q96DD0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LRRC39Q96DD0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LRRC39Q96DD0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRC39Q96DD0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LRRC39Q96DD0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC39Q96DD0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC39Q96DD0 AC007322.1-201ENST00000426983 750 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms