Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RHBDF1Q96CC6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.33■□□□□ 0.68
RHBDF1Q96CC6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RHBDF1Q96CC6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RHBDF1Q96CC6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
RHBDF1Q96CC6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RHBDF1Q96CC6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.33■□□□□ 0.68
RHBDF1Q96CC6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.33■□□□□ 0.68
RHBDF1Q96CC6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RHBDF1Q96CC6 PHGDH-210ENST00000641115 1638 ntBASIC19.33■□□□□ 0.68
RHBDF1Q96CC6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 RNF165-205ENST00000588679 2904 ntBASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 TREX1-205ENST00000625293 1783 ntBASIC19.32■□□□□ 0.68
RHBDF1Q96CC6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 MIR4758-201ENST00000577688 71 ntBASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.31■□□□□ 0.68
RHBDF1Q96CC6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 MYC-209ENST00000641252 345 ntBASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RHBDF1Q96CC6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 AC073210.2-201ENST00000430369 194 ntBASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 AC005829.2-201ENST00000571422 1056 ntBASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RHBDF1Q96CC6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms