Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 AC092053.2-201ENST00000640557 1818 ntBASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 SIGLEC30P-201ENST00000455569 941 ntBASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 ELK2BP-201ENST00000415014 1224 ntBASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 BCRP1-201ENST00000444246 691 ntBASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 RASA4DP-201ENST00000460726 1199 ntBASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC8.13□□□□□ -1.11
SYNE2Q8WXH0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 HLA-DPB2-205ENST00000435074 1188 ntBASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 YBX2P1-201ENST00000394192 760 ntBASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 AC015922.1-201ENST00000421102 1152 ntBASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 NMU-202ENST00000505262 693 ntTSL 3 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 AP000692.2-201ENST00000608391 879 ntBASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 AL023803.3-201ENST00000615559 522 ntBASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 KRT18P3-201ENST00000451602 1288 ntBASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 LINC00167-201ENST00000530583 1419 ntBASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 COA5-202ENST00000409997 557 ntTSL 4 BASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 AC004945.1-201ENST00000416738 983 ntBASIC8.12□□□□□ -1.11
SYNE2Q8WXH0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms