Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD6Q8TD26 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD6Q8TD26 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD6Q8TD26 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD6Q8TD26 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD6Q8TD26 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD6Q8TD26 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD6Q8TD26 SPDYE15P-201ENST00000424157 909 ntBASIC18.05■□□□□ 0.48
CHD6Q8TD26 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHD6Q8TD26 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
CHD6Q8TD26 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD6Q8TD26 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD6Q8TD26 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD6Q8TD26 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.05■□□□□ 0.48
CHD6Q8TD26 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHD6Q8TD26 C1QL1P1-201ENST00000568105 661 ntBASIC18.05■□□□□ 0.48
CHD6Q8TD26 AC064862.7-201ENST00000604520 867 ntBASIC18.05■□□□□ 0.48
CHD6Q8TD26 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.05■□□□□ 0.48
CHD6Q8TD26 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.05■□□□□ 0.48
CHD6Q8TD26 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.05■□□□□ 0.48
CHD6Q8TD26 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.05■□□□□ 0.48
CHD6Q8TD26 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CHD6Q8TD26 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD6Q8TD26 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD6Q8TD26 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD6Q8TD26 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.04■□□□□ 0.48
CHD6Q8TD26 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.04■□□□□ 0.48
CHD6Q8TD26 RNPS1P1-201ENST00000507437 918 ntBASIC18.04■□□□□ 0.48
CHD6Q8TD26 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.04■□□□□ 0.48
CHD6Q8TD26 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.04■□□□□ 0.48
CHD6Q8TD26 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.04■□□□□ 0.48
CHD6Q8TD26 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD6Q8TD26 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHD6Q8TD26 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.04■□□□□ 0.48
CHD6Q8TD26 AC008040.2-201ENST00000461049 708 ntBASIC18.04■□□□□ 0.48
CHD6Q8TD26 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.04■□□□□ 0.48
CHD6Q8TD26 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHD6Q8TD26 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.04■□□□□ 0.48
CHD6Q8TD26 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.04■□□□□ 0.48
CHD6Q8TD26 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.04■□□□□ 0.48
CHD6Q8TD26 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHD6Q8TD26 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CHD6Q8TD26 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHD6Q8TD26 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.03■□□□□ 0.48
CHD6Q8TD26 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHD6Q8TD26 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHD6Q8TD26 BX276092.5-203ENST00000456199 560 ntBASIC18.03■□□□□ 0.48
CHD6Q8TD26 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD6Q8TD26 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.03■□□□□ 0.48
CHD6Q8TD26 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.03■□□□□ 0.48
CHD6Q8TD26 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.03■□□□□ 0.48
CHD6Q8TD26 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHD6Q8TD26 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHD6Q8TD26 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD6Q8TD26 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD6Q8TD26 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.03■□□□□ 0.48
CHD6Q8TD26 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD6Q8TD26 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD6Q8TD26 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHD6Q8TD26 CHCHD2P8-201ENST00000429873 447 ntBASIC18.03■□□□□ 0.48
CHD6Q8TD26 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD6Q8TD26 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.03■□□□□ 0.48
CHD6Q8TD26 AC011298.2-201ENST00000617989 482 ntBASIC18.03■□□□□ 0.48
CHD6Q8TD26 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.03■□□□□ 0.48
CHD6Q8TD26 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHD6Q8TD26 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHD6Q8TD26 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHD6Q8TD26 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.02■□□□□ 0.48
CHD6Q8TD26 TSSC2-201ENST00000450217 709 ntBASIC18.02■□□□□ 0.48
CHD6Q8TD26 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.02■□□□□ 0.48
CHD6Q8TD26 GCSHP2-201ENST00000560971 527 ntBASIC18.02■□□□□ 0.48
CHD6Q8TD26 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.02■□□□□ 0.48
CHD6Q8TD26 ABCB10P4-201ENST00000566803 2184 ntBASIC18.02■□□□□ 0.48
CHD6Q8TD26 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.02■□□□□ 0.48
CHD6Q8TD26 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHD6Q8TD26 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHD6Q8TD26 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.02■□□□□ 0.48
CHD6Q8TD26 KRT18P67-201ENST00000432816 1264 ntBASIC18.02■□□□□ 0.48
CHD6Q8TD26 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHD6Q8TD26 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.02■□□□□ 0.48
CHD6Q8TD26 AC010327.4-202ENST00000591484 748 ntBASIC18.02■□□□□ 0.48
CHD6Q8TD26 AL121672.3-201ENST00000608644 468 ntBASIC18.02■□□□□ 0.48
CHD6Q8TD26 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.01■□□□□ 0.47
CHD6Q8TD26 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD6Q8TD26 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHD6Q8TD26 AC004967.1-201ENST00000453589 447 ntBASIC18.01■□□□□ 0.47
CHD6Q8TD26 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.01■□□□□ 0.47
CHD6Q8TD26 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD6Q8TD26 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.01■□□□□ 0.47
CHD6Q8TD26 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD6Q8TD26 IGHV3-22-201ENST00000520721 359 ntBASIC18.01■□□□□ 0.47
CHD6Q8TD26 NEK4P2-201ENST00000580004 1012 ntBASIC18.01■□□□□ 0.47
CHD6Q8TD26 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.01■□□□□ 0.47
CHD6Q8TD26 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.01■□□□□ 0.47
CHD6Q8TD26 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD6Q8TD26 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD6Q8TD26 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD6Q8TD26 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHD6Q8TD26 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD6Q8TD26 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms