Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 AC073508.3-201ENST00000619697 1419 ntBASIC15.49■□□□□ 0.07
LINC01006Q8NI28 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
LINC01006Q8NI28 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 AC006128.1-201ENST00000624704 1661 ntBASIC15.48■□□□□ 0.07
LINC01006Q8NI28 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.48■□□□□ 0.07
LINC01006Q8NI28 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
LINC01006Q8NI28 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 AC018553.1-201ENST00000616682 1458 ntBASIC15.47■□□□□ 0.07
LINC01006Q8NI28 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 TUBB8P6-201ENST00000436895 1288 ntBASIC15.47■□□□□ 0.07
LINC01006Q8NI28 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 B3GAT3P1-201ENST00000471720 806 ntBASIC15.47■□□□□ 0.07
LINC01006Q8NI28 KRT18P16-201ENST00000510337 1294 ntBASIC15.47■□□□□ 0.07
LINC01006Q8NI28 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 C2orf69P3-201ENST00000565542 1120 ntBASIC15.47■□□□□ 0.07
LINC01006Q8NI28 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 DGCR10-201ENST00000609839 495 ntBASIC15.47■□□□□ 0.07
LINC01006Q8NI28 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LINC01006Q8NI28 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01006Q8NI28 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01006Q8NI28 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01006Q8NI28 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
LINC01006Q8NI28 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LINC01006Q8NI28 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.46■□□□□ 0.07
LINC01006Q8NI28 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.46■□□□□ 0.07
LINC01006Q8NI28 AP005242.2-201ENST00000580065 1175 ntBASIC15.46■□□□□ 0.07
LINC01006Q8NI28 AC131212.4-201ENST00000623606 975 ntBASIC15.46■□□□□ 0.07
LINC01006Q8NI28 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.46■□□□□ 0.07
LINC01006Q8NI28 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LINC01006Q8NI28 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01006Q8NI28 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.46■□□□□ 0.07
LINC01006Q8NI28 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LINC01006Q8NI28 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LINC01006Q8NI28 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LINC01006Q8NI28 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LINC01006Q8NI28 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LINC01006Q8NI28 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LINC01006Q8NI28 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
LINC01006Q8NI28 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 AC007225.1-201ENST00000566331 1836 ntBASIC15.45■□□□□ 0.06
LINC01006Q8NI28 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms