Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
BBS1Q8NFJ9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BBS1Q8NFJ9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
BBS1Q8NFJ9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 AC010536.3-201ENST00000620306 533 ntBASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BBS1Q8NFJ9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 KRT8P17-201ENST00000453110 1448 ntBASIC17.81■□□□□ 0.44
BBS1Q8NFJ9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 ZNRF2P3-201ENST00000424200 374 ntBASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.8■□□□□ 0.44
BBS1Q8NFJ9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BBS1Q8NFJ9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BBS1Q8NFJ9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
BBS1Q8NFJ9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.79■□□□□ 0.44
BBS1Q8NFJ9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BBS1Q8NFJ9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.79■□□□□ 0.44
BBS1Q8NFJ9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BBS1Q8NFJ9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BBS1Q8NFJ9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
BBS1Q8NFJ9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.79■□□□□ 0.44
BBS1Q8NFJ9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
BBS1Q8NFJ9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
BBS1Q8NFJ9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms