Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC38A9Q8NBW4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 AC116351.2-201ENST00000606540 1585 ntBASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 AC073195.1-201ENST00000607241 877 ntBASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC38A9Q8NBW4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 AL355355.2-201ENST00000442321 338 ntBASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 AL353708.3-201ENST00000610272 989 ntBASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 KRT16P6-202ENST00000425692 1426 ntBASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 TFP1-202ENST00000475455 1573 ntBASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC38A9Q8NBW4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 AC018553.1-201ENST00000616682 1458 ntBASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 AC087499.1-201ENST00000418141 1075 ntBASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 AP002982.1-201ENST00000492365 877 ntBASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC38A9Q8NBW4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms