Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 PCDHAC2-203ENST00000615316 3011 ntBASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.14■□□□□ 0.65
LINC01555Q8NAE3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 AL023875.1-201ENST00000640777 796 ntBASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 AC073130.3-201ENST00000624389 2278 ntBASIC19.13■□□□□ 0.65
LINC01555Q8NAE3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 GCSHP5-201ENST00000443090 522 ntBASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 C1QBPP2-201ENST00000528754 825 ntBASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LINC01555Q8NAE3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 RPPH1-201ENST00000516869 333 ntBASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 AC124016.1-201ENST00000609552 612 ntBASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 AL359736.2-201ENST00000621992 437 ntBASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.11■□□□□ 0.65
LINC01555Q8NAE3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.1■□□□□ 0.65
LINC01555Q8NAE3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms