Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH20Q8N6Y1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 AL158047.1-201ENST00000445918 881 ntBASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 C1QBPP2-201ENST00000528754 825 ntBASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 AL121829.2-201ENST00000620908 328 ntBASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 AL359736.2-201ENST00000621992 437 ntBASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PCDH20Q8N6Y1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 RPPH1-201ENST00000516869 333 ntBASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 AL391422.3-201ENST00000603791 2761 ntBASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH20Q8N6Y1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 AC020907.5-201ENST00000624372 1936 ntBASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 KRT16P6-202ENST00000425692 1426 ntBASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 AL121906.2-201ENST00000621597 723 ntBASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 PCDHAC2-203ENST00000615316 3011 ntBASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDH20Q8N6Y1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 AC124283.5-201ENST00000624661 1809 ntBASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDH20Q8N6Y1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms