Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 C2orf69P4-201ENST00000565394 541 ntBASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 Z99916.2-201ENST00000604037 246 ntBASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC33Q8N5R6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 POM121L13P-201ENST00000422362 380 ntBASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC33Q8N5R6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC33Q8N5R6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC33Q8N5R6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC33Q8N5R6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC33Q8N5R6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC33Q8N5R6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC33Q8N5R6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms