Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DEPDC4Q8N2C3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DEPDC4Q8N2C3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DEPDC4Q8N2C3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DEPDC4Q8N2C3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DEPDC4Q8N2C3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 AC245052.3-201ENST00000450182 901 ntBASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 AC011767.1-201ENST00000617410 1153 ntBASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 AC004408.2-201ENST00000623613 2777 ntBASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DEPDC4Q8N2C3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
DEPDC4Q8N2C3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
DEPDC4Q8N2C3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
DEPDC4Q8N2C3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 KRT18P20-201ENST00000548986 1279 ntBASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 AC120498.10-201ENST00000621827 505 ntBASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
DEPDC4Q8N2C3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 LETM1P2-201ENST00000597330 2178 ntBASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 AC026185.1-201ENST00000445748 174 ntBASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 AC138907.5-202ENST00000569484 235 ntBASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.38■□□□□ 0.53
DEPDC4Q8N2C3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 AC073111.5-205ENST00000641717 521 ntBASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 AC116050.2-201ENST00000612102 1779 ntBASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 AC093484.2-201ENST00000580996 2166 ntBASIC18.37■□□□□ 0.53
DEPDC4Q8N2C3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms