Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 AL031985.4-201ENST00000642138 673 ntBASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TMEFF1Q8IYR6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 AC010203.1-204ENST00000548782 407 ntBASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 AL049796.1-201ENST00000565336 1766 ntBASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEFF1Q8IYR6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 LIN28AP1-201ENST00000429574 405 ntBASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 AC087388.1-201ENST00000571370 1112 ntBASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 FEM1AP4-201ENST00000443167 1987 ntBASIC19.74■□□□□ 0.75
TMEFF1Q8IYR6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 KRT8P17-201ENST00000453110 1448 ntBASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 AL121603.2-201ENST00000557373 2117 ntBASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 FSCN1P1-201ENST00000568912 1481 ntBASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEFF1Q8IYR6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 AP006587.1-201ENST00000534129 1502 ntBASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 ATP5G1P1-201ENST00000448724 379 ntBASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
TMEFF1Q8IYR6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 AC005229.4-201ENST00000610085 2198 ntBASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms