Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 RPS2P55-201ENST00000397318 883 ntBASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 SNORA78-201ENST00000459373 127 ntBASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 AC107956.1-201ENST00000494359 873 ntBASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SCN4BQ8IWT1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.93■□□□□ 0.94
SCN4BQ8IWT1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.93■□□□□ 0.94
SCN4BQ8IWT1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.93■□□□□ 0.94
SCN4BQ8IWT1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCN4BQ8IWT1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SCN4BQ8IWT1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
SCN4BQ8IWT1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
SCN4BQ8IWT1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SCN4BQ8IWT1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
SCN4BQ8IWT1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SCN4BQ8IWT1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SCN4BQ8IWT1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
SCN4BQ8IWT1 CLDN5-201ENST00000403084 2357 ntBASIC20.93■□□□□ 0.94
SCN4BQ8IWT1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 AC012618.2-201ENST00000428058 849 ntBASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN4BQ8IWT1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 KRT16P5-201ENST00000455284 522 ntBASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 RARRES2P10-201ENST00000564312 460 ntBASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 MIR4497-201ENST00000583208 89 ntBASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 AC233702.5-201ENST00000584107 538 ntBASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 AC004264.1-201ENST00000608354 794 ntBASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
SCN4BQ8IWT1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 AL135905.2-201ENST00000584934 1404 ntBASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 HTR7P1-201ENST00000538670 1336 ntBASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN4BQ8IWT1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms