Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 AF186192.3-201ENST00000583427 947 ntBASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 AC004264.1-201ENST00000608354 794 ntBASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
CCDC60Q8IWA6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 AP001412.1-201ENST00000608405 714 ntBASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 AP006587.1-201ENST00000534129 1502 ntBASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCDC60Q8IWA6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 AL162377.1-201ENST00000618844 1793 ntBASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 GABARAPL3-202ENST00000624044 1851 ntBASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCDC60Q8IWA6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC60Q8IWA6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC60Q8IWA6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC60Q8IWA6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
CCDC60Q8IWA6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC60Q8IWA6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.08■■□□□ 1.13
CCDC60Q8IWA6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.08■■□□□ 1.13
CCDC60Q8IWA6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.08■■□□□ 1.13
CCDC60Q8IWA6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.08■■□□□ 1.13
CCDC60Q8IWA6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.08■■□□□ 1.13
CCDC60Q8IWA6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.08■■□□□ 1.12
CCDC60Q8IWA6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.08■■□□□ 1.12
CCDC60Q8IWA6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.12
CCDC60Q8IWA6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CCDC60Q8IWA6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CCDC60Q8IWA6 AL391422.3-201ENST00000603791 2761 ntBASIC22.07■■□□□ 1.12
CCDC60Q8IWA6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC60Q8IWA6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC60Q8IWA6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC60Q8IWA6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.07■■□□□ 1.12
CCDC60Q8IWA6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.07■■□□□ 1.12
CCDC60Q8IWA6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.07■■□□□ 1.12
CCDC60Q8IWA6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC60Q8IWA6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC60Q8IWA6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC60Q8IWA6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.07■■□□□ 1.12
CCDC60Q8IWA6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC60Q8IWA6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.07■■□□□ 1.12
CCDC60Q8IWA6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms