Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 TUBB8P6-201ENST00000436895 1288 ntBASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 AC018553.1-201ENST00000616682 1458 ntBASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.36■■□□□ 1.01
NPAS4Q8IUM7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 AC004980.1-204ENST00000429707 299 ntBASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPAS4Q8IUM7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 AC011506.1-201ENST00000474329 610 ntBASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 AC131212.4-201ENST00000623606 975 ntBASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NPAS4Q8IUM7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 EGLN1P1-201ENST00000531623 762 ntBASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.33■■□□□ 1.01
NPAS4Q8IUM7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.33■■□□□ 1
NPAS4Q8IUM7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NPAS4Q8IUM7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NPAS4Q8IUM7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
NPAS4Q8IUM7 AC007225.1-201ENST00000566331 1836 ntBASIC21.32■■□□□ 1
NPAS4Q8IUM7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.32■■□□□ 1
NPAS4Q8IUM7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.32■■□□□ 1
NPAS4Q8IUM7 TSPY14P-201ENST00000303979 915 ntBASIC21.32■■□□□ 1
NPAS4Q8IUM7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.32■■□□□ 1
NPAS4Q8IUM7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.32■■□□□ 1
NPAS4Q8IUM7 DUX4L26-201ENST00000489078 1255 ntBASIC21.32■■□□□ 1
NPAS4Q8IUM7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.32■■□□□ 1
NPAS4Q8IUM7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.32■■□□□ 1
NPAS4Q8IUM7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
NPAS4Q8IUM7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPAS4Q8IUM7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.32■■□□□ 1
NPAS4Q8IUM7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
NPAS4Q8IUM7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.31■■□□□ 1
NPAS4Q8IUM7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPAS4Q8IUM7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.31■■□□□ 1
NPAS4Q8IUM7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
NPAS4Q8IUM7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPAS4Q8IUM7 AC097488.1-201ENST00000507834 756 ntBASIC21.31■■□□□ 1
NPAS4Q8IUM7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.31■■□□□ 1
NPAS4Q8IUM7 AC010203.1-204ENST00000548782 407 ntBASIC21.31■■□□□ 1
NPAS4Q8IUM7 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.31■■□□□ 1
NPAS4Q8IUM7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.31■■□□□ 1
NPAS4Q8IUM7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
NPAS4Q8IUM7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.31■■□□□ 1
NPAS4Q8IUM7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms