Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC29.8■■■□□ 2.36
CCDC141Q6ZP82 RCC2P6-201ENST00000526625 1557 ntBASIC29.8■■■□□ 2.36
CCDC141Q6ZP82 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC141Q6ZP82 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
CCDC141Q6ZP82 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
CCDC141Q6ZP82 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC29.79■■■□□ 2.36
CCDC141Q6ZP82 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC29.79■■■□□ 2.36
CCDC141Q6ZP82 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC29.79■■■□□ 2.36
CCDC141Q6ZP82 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC29.79■■■□□ 2.36
CCDC141Q6ZP82 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC141Q6ZP82 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC29.78■■■□□ 2.36
CCDC141Q6ZP82 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC141Q6ZP82 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC141Q6ZP82 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC141Q6ZP82 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC141Q6ZP82 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC141Q6ZP82 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC29.78■■■□□ 2.36
CCDC141Q6ZP82 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC141Q6ZP82 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC141Q6ZP82 HLA-A-209ENST00000638375 975 ntBASIC29.78■■■□□ 2.36
CCDC141Q6ZP82 LGALS8-AS1-201ENST00000487567 1457 ntBASIC29.78■■■□□ 2.36
CCDC141Q6ZP82 AC007225.1-201ENST00000566331 1836 ntBASIC29.77■■■□□ 2.36
CCDC141Q6ZP82 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CCDC141Q6ZP82 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CCDC141Q6ZP82 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CCDC141Q6ZP82 AC104076.2-201ENST00000448912 469 ntBASIC29.77■■■□□ 2.36
CCDC141Q6ZP82 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC29.77■■■□□ 2.36
CCDC141Q6ZP82 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC29.77■■■□□ 2.36
CCDC141Q6ZP82 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CCDC141Q6ZP82 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC29.77■■■□□ 2.36
CCDC141Q6ZP82 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC29.77■■■□□ 2.36
CCDC141Q6ZP82 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CCDC141Q6ZP82 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC29.76■■■□□ 2.36
CCDC141Q6ZP82 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC29.76■■■□□ 2.36
CCDC141Q6ZP82 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
CCDC141Q6ZP82 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CCDC141Q6ZP82 ECEL1P2-202ENST00000465689 757 ntBASIC29.76■■■□□ 2.35
CCDC141Q6ZP82 NTF6B-201ENST00000591913 560 ntBASIC29.76■■■□□ 2.35
CCDC141Q6ZP82 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
CCDC141Q6ZP82 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CCDC141Q6ZP82 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 AC096733.2-201ENST00000609937 1394 ntBASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 WWOX-216ENST00000569818 525 ntBASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CCDC141Q6ZP82 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 INGX-201ENST00000359239 846 ntBASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 FDX2-206ENST00000492239 773 ntTSL 2 BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 AC097488.1-201ENST00000507834 756 ntBASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC29.74■■■□□ 2.35
CCDC141Q6ZP82 AC133561.1-201ENST00000568600 2415 ntBASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 PTPA-216ENST00000432651 857 ntTSL 2 BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 AC131212.4-201ENST00000623606 975 ntBASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC141Q6ZP82 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC29.72■■■□□ 2.35
CCDC141Q6ZP82 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC141Q6ZP82 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
CCDC141Q6ZP82 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC141Q6ZP82 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC141Q6ZP82 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC141Q6ZP82 AC092720.2-201ENST00000602388 1665 ntBASIC29.72■■■□□ 2.35
CCDC141Q6ZP82 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms