Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF549Q6P9A3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF549Q6P9A3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF549Q6P9A3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 DUSP5P2-201ENST00000426873 1033 ntBASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 TREX1-205ENST00000625293 1783 ntBASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF549Q6P9A3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 AC092118.2-201ENST00000613495 667 ntBASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF549Q6P9A3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF549Q6P9A3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 AC091874.3-201ENST00000512672 1195 ntBASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.66■□□□□ 0.74
ZNF549Q6P9A3 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.65■□□□□ 0.74
ZNF549Q6P9A3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms