Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PTCRAQ6ISU1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PTCRAQ6ISU1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 AP000347.1-202ENST00000435868 847 ntBASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 PRSS44-201ENST00000515154 1146 ntBASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 AL136038.3-201ENST00000561909 1096 ntBASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 AC008622.2-201ENST00000617006 1229 ntBASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
PTCRAQ6ISU1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 PVRIG2P-201ENST00000435460 978 ntBASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 TUBB8P6-201ENST00000436895 1288 ntBASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 FDX1P1-201ENST00000449115 551 ntBASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 TSPY17P-201ENST00000450329 467 ntBASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.53■□□□□ 0.88
PTCRAQ6ISU1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.52■□□□□ 0.88
PTCRAQ6ISU1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCRAQ6ISU1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.52■□□□□ 0.88
PTCRAQ6ISU1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCRAQ6ISU1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCRAQ6ISU1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCRAQ6ISU1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCRAQ6ISU1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCRAQ6ISU1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTCRAQ6ISU1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCRAQ6ISU1 YBX1P10-201ENST00000444752 975 ntBASIC20.52■□□□□ 0.88
PTCRAQ6ISU1 KRT18P38-201ENST00000449496 1282 ntBASIC20.52■□□□□ 0.88
PTCRAQ6ISU1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.52■□□□□ 0.88
PTCRAQ6ISU1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.52■□□□□ 0.88
PTCRAQ6ISU1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
PTCRAQ6ISU1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PTCRAQ6ISU1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 TSPY21P-201ENST00000433481 731 ntBASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 TSPY23P-201ENST00000440136 739 ntBASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 KRT18P16-201ENST00000510337 1294 ntBASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 RN7SL510P-201ENST00000581311 263 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms